Cow genome map
| Conread name: | Ova1-OVRM10212B12 |
| Conread position: | 192-552 |
| Cow position: | chr11:59369704-59370072 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 110 |
| Conread position: | 192-555 |
| Cow position: | chr11:28063725-28064084 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 21 |
| Conread position: | 198-421 |
| Cow position: | chr11:30124531-30124297 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 70, 19 |
| Conread position: | 199-555 |
| Cow position: | chr11:66727264-66727627 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 202-663 |
| Cow position: | chr11:10090570-10091070 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 46 |
| Conread position: | 203-427 |
| Cow position: | chr11:9220057-9219839 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 206-555 |
| Cow position: | chr11:28049301-28048954 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 213-555 |
| Cow position: | chr11:52886140-52885810 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 66, 118 |
| Conread position: | 217-547 |
| Cow position: | chr11:15899036-15898700 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 17, 249 |
| Conread position: | 217-673 |
| Cow position: | chr11:62229117-62229588 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 101 |
| Conread position: | 220-419 |
| Cow position: | chr11:39802355-39802563 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 78 |
| Conread position: | 235-554 |
| Cow position: | chr11:33194632-33194306 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 216 |
| Conread position: | 242-421 |
| Cow position: | chr11:30125311-30125123 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 251-554 |
| Cow position: | chr11:44157305-44156997 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 31 |
| Conread position: | 259-663 |
| Cow position: | chr11:19102531-19102105 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 262-554 |
| Cow position: | chr11:10847403-10847699 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 262-555 |
| Cow position: | chr11:23877263-23877560 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 266-672 |
| Cow position: | chr11:9734711-9734273 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 375 |
| Conread position: | 270-555 |
| Cow position: | chr11:12358457-12358167 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 45 |
| Conread position: | 270-555 |
| Cow position: | chr11:22934767-22935047 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 270-555 |
| Cow position: | chr11:58134355-58134644 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 274-441 |
| Cow position: | chr11:54209581-54209754 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 277-673 |
| Cow position: | chr11:76374231-76373815 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 279-663 |
| Cow position: | chr11:31874801-31874388 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 281-543 |
| Cow position: | chr11:20510103-20510366 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 281-553 |
| Cow position: | chr11:12093536-12093809 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 65 |
| Conread position: | 281-554 |
| Cow position: | chr11:9157176-9156904 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 281-555 |
| Cow position: | chr11:4027585-4027310 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 281-555 |
| Cow position: | chr11:4270883-4270605 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-555 |
| Cow position: | chr11:11988085-11988364 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-555 |
| Cow position: | chr11:41170714-41170436 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-555 |
| Cow position: | chr11:44251777-44252049 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 281-555 |
| Cow position: | chr11:53432088-53431809 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-673 |
| Cow position: | chr11:38835453-38835034 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 295-672 |
| Cow position: | chr11:17107702-17107287 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 179 |
| Conread position: | 296-554 |
| Cow position: | chr11:28229772-28229509 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 233 |
| Conread position: | 296-671 |
| Cow position: | chr11:67450483-67450891 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 297-555 |
| Cow position: | chr11:46246569-46246300 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 74, 45 |
| Conread position: | 298-555 |
| Cow position: | chr11:8245302-8245565 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 298-555 |
| Cow position: | chr11:85393817-85393555 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 130 |
| Conread position: | 304-672 |
| Cow position: | chr11:43514636-43514233 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 305-554 |
| Cow position: | chr11:3493005-3493246 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 66, 168 |
| Conread position: | 305-554 |
| Cow position: | chr11:57628052-57627789 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 305-672 |
| Cow position: | chr11:19064255-19063850 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 221 |
| Conread position: | 305-672 |
| Cow position: | chr11:67846577-67846169 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 305-673 |
| Cow position: | chr11:24393319-24393720 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 373 |
| Conread position: | 330-555 |
| Cow position: | chr11:7116239-7116470 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 41, 54 |
Show alignments to all cow chromosomes.