Cow genome map


           Conread name:
           Ova1-OVRM10212B12
        

               Conread position:
               191-555
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               20, 194
               

               Conread position:
               198-553
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 226
               

               Conread position:
               198-555
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               66, 86
               

               Conread position:
               199-552
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               210-480
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 14
               

               Conread position:
               213-511
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               87, 130
               

               Conread position:
               217-551
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               10, 15
               

               Conread position:
               246-555
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               251-555
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 54
               

               Conread position:
               257-663
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 25
               

               Conread position:
               262-673
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               265-555
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 12
               

               Conread position:
               266-555
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 10
               

               Conread position:
               271-554
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 6
               

               Conread position:
               274-552
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 141
               

               Conread position:
               281-428
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               90, 8
               

               Conread position:
               281-554
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               281-555
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               281-555
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 20
               

               Conread position:
               281-555
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               281-555
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 8
               

               Conread position:
               281-555
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 11
               

               Conread position:
               281-659
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 38
               

               Conread position:
               281-663
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               281-663
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               281-672
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 5
               

               Conread position:
               281-673
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               285-562
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 279
               

               Conread position:
               291-437
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 56
               

               Conread position:
               291-555
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               291-555
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 212
               

               Conread position:
               296-530
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               296-554
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               296-672
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               296-672
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               294
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               75, 169
               

               Conread position:
               298-541
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               83, 77
               

               Conread position:
               298-555
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               298-555
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               298-555
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               303-554
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 163
               

               Conread position:
               305-553
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 117
               

               Conread position:
               308-554
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 194
               

               Conread position:
               310-555
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               315-555
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 111
               

               Conread position:
               315-651
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               329-555
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               43, 98
               

               Conread position:
               329-673
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               383-672
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 0
               
Show alignments to all cow chromosomes.