Cow genome map
| Conread name: | Ova1-OVRM10212B12 |
| Conread position: | 191-555 |
| Cow position: | chr15:40105699-40106058 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 20, 194 |
| Conread position: | 198-553 |
| Cow position: | chr15:35735407-35735768 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 226 |
| Conread position: | 198-555 |
| Cow position: | chr15:16507829-16508186 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 86 |
| Conread position: | 199-552 |
| Cow position: | chr15:6622927-6623286 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 210-480 |
| Cow position: | chr15:36642784-36643058 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 14 |
| Conread position: | 213-511 |
| Cow position: | chr15:12615326-12615619 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 87, 130 |
| Conread position: | 217-551 |
| Cow position: | chr15:1237545-1237872 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 10, 15 |
| Conread position: | 246-555 |
| Cow position: | chr15:4961531-4961839 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 251-555 |
| Cow position: | chr15:24294983-24295294 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 54 |
| Conread position: | 257-663 |
| Cow position: | chr15:8750324-8750750 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 262-673 |
| Cow position: | chr15:7837148-7837594 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 265-555 |
| Cow position: | chr15:32673640-32673353 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 12 |
| Conread position: | 266-555 |
| Cow position: | chr15:9912543-9912831 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 10 |
| Conread position: | 271-554 |
| Cow position: | chr15:12421257-12420967 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 6 |
| Conread position: | 274-552 |
| Cow position: | chr15:18332916-18332632 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 141 |
| Conread position: | 281-428 |
| Cow position: | chr15:2924808-2924952 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 90, 8 |
| Conread position: | 281-554 |
| Cow position: | chr15:42936635-42936907 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-555 |
| Cow position: | chr15:315938-315661 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 11 |
| Conread position: | 281-555 |
| Cow position: | chr15:4385189-4385463 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 20 |
| Conread position: | 281-555 |
| Cow position: | chr15:4671350-4671632 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 281-555 |
| Cow position: | chr15:6156032-6155749 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 8 |
| Conread position: | 281-555 |
| Cow position: | chr15:51216510-51216785 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 281-659 |
| Cow position: | chr15:21665825-21665414 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 38 |
| Conread position: | 281-663 |
| Cow position: | chr15:15347198-15346779 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-663 |
| Cow position: | chr15:18576635-18577051 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-672 |
| Cow position: | chr15:8099409-8099821 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 5 |
| Conread position: | 281-673 |
| Cow position: | chr15:19738132-19737705 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 285-562 |
| Cow position: | chr15:328351-328635 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 279 |
| Conread position: | 291-437 |
| Cow position: | chr15:4682161-4682312 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 56 |
| Conread position: | 291-555 |
| Cow position: | chr15:4765135-4765405 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 291-555 |
| Cow position: | chr15:17292368-17292642 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 212 |
| Conread position: | 296-530 |
| Cow position: | chr15:29009768-29010008 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 296-554 |
| Cow position: | chr15:4142889-4142625 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 296-672 |
| Cow position: | chr15:18268058-18267643 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 296-672 |
| Cow position: | chr15:50147007-50147411 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 294 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 75, 169 |
| Conread position: | 298-541 |
| Cow position: | chr15:41366108-41366353 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 83, 77 |
| Conread position: | 298-555 |
| Cow position: | chr15:524924-524661 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 298-555 |
| Cow position: | chr15:2076586-2076847 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 298-555 |
| Cow position: | chr15:35753660-35753397 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 303-554 |
| Cow position: | chr15:42320485-42320229 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 163 |
| Conread position: | 305-553 |
| Cow position: | chr15:3009913-3009660 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 117 |
| Conread position: | 308-554 |
| Cow position: | chr15:444548-444798 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 194 |
| Conread position: | 310-555 |
| Cow position: | chr15:3842480-3842225 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 9 |
| Conread position: | 315-555 |
| Cow position: | chr15:7894279-7894037 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 111 |
| Conread position: | 315-651 |
| Cow position: | chr15:32494433-32494061 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 329-555 |
| Cow position: | chr15:6078725-6078947 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 43, 98 |
| Conread position: | 329-673 |
| Cow position: | chr15:35647699-35647322 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 383-672 |
| Cow position: | chr15:32711124-32711437 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
Show alignments to all cow chromosomes.