Cow genome map
| Conread name: | Ova1-OVRM10212B12 |
| Conread position: | 178-555 |
| Cow position: | chr16:49235349-49234978 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 12 |
| Conread position: | 183-672 |
| Cow position: | chr16:10376113-10375597 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 333 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 102, 302 |
| Conread position: | 185-555 |
| Cow position: | chr16:42739619-42739254 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 26 |
| Conread position: | 191-555 |
| Cow position: | chr16:25156398-25156025 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 191-555 |
| Cow position: | chr16:25257417-25257788 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 309 |
| Conread position: | 198-555 |
| Cow position: | chr16:29033538-29033894 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 27 |
| Conread position: | 202-543 |
| Cow position: | chr16:18764125-18763785 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 245-555 |
| Cow position: | chr16:14666274-14665960 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 251-673 |
| Cow position: | chr16:25085186-25085622 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 44 |
| Conread position: | 254-555 |
| Cow position: | chr16:1567906-1567601 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 257-555 |
| Cow position: | chr16:12538374-12538073 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 24 |
| Conread position: | 261-663 |
| Cow position: | chr16:10437797-10438229 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 262-555 |
| Cow position: | chr16:2411412-2411115 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 262-555 |
| Cow position: | chr16:15184360-15184648 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 15 |
| Conread position: | 270-412 |
| Cow position: | chr16:36361798-36361655 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 270-659 |
| Cow position: | chr16:25341529-25341945 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 31 |
| Conread position: | 270-672 |
| Cow position: | chr16:34529885-34530314 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 271-555 |
| Cow position: | chr16:5483884-5484172 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 6 |
| Conread position: | 271-555 |
| Cow position: | chr16:10203869-10203587 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 6 |
| Conread position: | 281-430 |
| Cow position: | chr16:1431731-1431885 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 5 |
| Conread position: | 281-555 |
| Cow position: | chr16:2727714-2727435 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 281-555 |
| Cow position: | chr16:8816530-8816253 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 21 |
| Conread position: | 281-555 |
| Cow position: | chr16:25441198-25441479 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-555 |
| Cow position: | chr16:25457891-25457612 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-555 |
| Cow position: | chr16:28471528-28471250 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 281-555 |
| Cow position: | chr16:40296604-40296325 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-620 |
| Cow position: | chr16:2239166-2238815 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 281-673 |
| Cow position: | chr16:407457-407031 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 281-673 |
| Cow position: | chr16:2483568-2483137 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 281-673 |
| Cow position: | chr16:29046596-29047025 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 282-555 |
| Cow position: | chr16:23982885-23983161 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 19 |
| Conread position: | 285-554 |
| Cow position: | chr16:31832202-31832477 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 178 |
| Conread position: | 295-491 |
| Cow position: | chr16:18687542-18687340 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 296-569 |
| Cow position: | chr16:28170783-28170509 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 264 |
| Conread position: | 305-663 |
| Cow position: | chr16:23252910-23252516 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 159 |
| Conread position: | 305-672 |
| Cow position: | chr16:41163469-41163070 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 335 |
| Conread position: | 329-555 |
| Cow position: | chr16:24105325-24105555 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 197 |
Show alignments to all cow chromosomes.