Cow genome map
Conread name: | Ova1-OVRM10212B12 |
Conread position: | 187-673 |
Cow position: | chr2:39622338-39622839 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 26 |
Conread position: | 191-555 |
Cow position: | chr2:34564894-34564535 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 268 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 20, 34 |
Conread position: | 193-554 |
Cow position: | chr2:63978024-63978390 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 35 |
Conread position: | 198-459 |
Cow position: | chr2:1362885-1363148 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 20 |
Conread position: | 198-663 |
Cow position: | chr2:36030611-36030139 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 15 |
Conread position: | 199-672 |
Cow position: | chr2:36053271-36052780 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 29 |
Conread position: | 200-660 |
Cow position: | chr2:199064-198571 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 80 |
Conread position: | 203-430 |
Cow position: | chr2:78742033-78742269 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 173 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 83, 10 |
Conread position: | 203-555 |
Cow position: | chr2:5963357-5962997 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 22 |
Conread position: | 203-672 |
Cow position: | chr2:41686232-41686737 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 307 |
Conread position: | 210-555 |
Cow position: | chr2:28643082-28642737 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 14 |
Conread position: | 213-507 |
Cow position: | chr2:7902757-7903051 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 121 |
Conread position: | 238-555 |
Cow position: | chr2:53329527-53329839 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 7 |
Conread position: | 242-526 |
Cow position: | chr2:49604716-49604989 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 89 |
Conread position: | 246-519 |
Cow position: | chr2:69584857-69584578 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 46 |
Conread position: | 251-673 |
Cow position: | chr2:36980151-36980610 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 31 |
Conread position: | 262-554 |
Cow position: | chr2:10186444-10186152 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 20 |
Conread position: | 262-555 |
Cow position: | chr2:10268871-10268576 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 12 |
Conread position: | 262-555 |
Cow position: | chr2:11159338-11159042 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 7 |
Conread position: | 262-672 |
Cow position: | chr2:65938661-65938222 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 18 |
Conread position: | 262-673 |
Cow position: | chr2:28793040-28793478 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 30 |
Conread position: | 269-575 |
Cow position: | chr2:52062461-52062770 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 46 |
Conread position: | 270-673 |
Cow position: | chr2:13045910-13045475 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 12 |
Conread position: | 275-554 |
Cow position: | chr2:78762259-78762525 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 212 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 17, 10 |
Conread position: | 277-673 |
Cow position: | chr2:5813583-5813164 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 9 |
Conread position: | 281-449 |
Cow position: | chr2:4926370-4926197 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 134 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 90, 11 |
Conread position: | 281-555 |
Cow position: | chr2:282886-282608 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 34 |
Conread position: | 281-555 |
Cow position: | chr2:24146665-24146943 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 11 |
Conread position: | 281-555 |
Cow position: | chr2:44991490-44991213 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 5 |
Conread position: | 281-555 |
Cow position: | chr2:81256611-81256892 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 6 |
Conread position: | 282-629 |
Cow position: | chr2:5870552-5870183 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 74 |
Conread position: | 285-437 |
Cow position: | chr2:51990728-51990571 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 86, 132 |
Conread position: | 285-672 |
Cow position: | chr2:51990446-51990027 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 132 |
Conread position: | 296-466 |
Cow position: | chr2:2184443-2184267 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 130 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 296-552 |
Cow position: | chr2:39421392-39421652 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 181 |
Conread position: | 296-554 |
Cow position: | chr2:3324751-3324483 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 296-554 |
Cow position: | chr2:57588509-57588773 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 296-668 |
Cow position: | chr2:2412983-2412572 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 296-672 |
Cow position: | chr2:4403344-4402931 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 296-672 |
Cow position: | chr2:10611813-10611408 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 131 |
Conread position: | 296-672 |
Cow position: | chr2:47038601-47038186 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 296-672 |
Cow position: | chr2:57335009-57335424 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 301-554 |
Cow position: | chr2:19011165-19011424 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 304-554 |
Cow position: | chr2:2380929-2381184 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 113 |
Conread position: | 304-673 |
Cow position: | chr2:10732943-10732545 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 243 |
Conread position: | 305-548 |
Cow position: | chr2:50983400-50983152 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 123 |
Conread position: | 305-554 |
Cow position: | chr2:25030654-25030403 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 123 |
Conread position: | 305-554 |
Cow position: | chr2:28650403-28650150 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 305-555 |
Cow position: | chr2:8118365-8118621 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 305-672 |
Cow position: | chr2:9907735-9908141 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 308-673 |
Cow position: | chr2:16900081-16900481 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 312-673 |
Cow position: | chr2:80293118-80292723 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 328-555 |
Cow position: | chr2:781588-781359 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 175 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 41, 139 |
Conread position: | 337-555 |
Cow position: | chr2:16290196-16290420 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 340-555 |
Cow position: | chr2:903893-904101 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 164 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 32, 75 |
Conread position: | 465-673 |
Cow position: | chr2:41150614-41150847 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 172 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.