Cow genome map

Conread name: Ova1-OVRM10212B12

Conread position: 187-673
Cow position: chr2:39622338-39622839 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 26

Conread position: 191-555
Cow position: chr2:34564894-34564535 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 34

Conread position: 193-554
Cow position: chr2:63978024-63978390 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 35

Conread position: 198-459
Cow position: chr2:1362885-1363148 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 20

Conread position: 198-663
Cow position: chr2:36030611-36030139 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 15

Conread position: 199-672
Cow position: chr2:36053271-36052780 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 200-660
Cow position: chr2:199064-198571 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 80

Conread position: 203-430
Cow position: chr2:78742033-78742269 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 10

Conread position: 203-555
Cow position: chr2:5963357-5962997 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 203-672
Cow position: chr2:41686232-41686737 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 307

Conread position: 210-555
Cow position: chr2:28643082-28642737 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 14

Conread position: 213-507
Cow position: chr2:7902757-7903051 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 121

Conread position: 238-555
Cow position: chr2:53329527-53329839 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 7

Conread position: 242-526
Cow position: chr2:49604716-49604989 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 89

Conread position: 246-519
Cow position: chr2:69584857-69584578 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 46

Conread position: 251-673
Cow position: chr2:36980151-36980610 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 31

Conread position: 262-554
Cow position: chr2:10186444-10186152 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 20

Conread position: 262-555
Cow position: chr2:10268871-10268576 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 12

Conread position: 262-555
Cow position: chr2:11159338-11159042 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 7

Conread position: 262-672
Cow position: chr2:65938661-65938222 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 18

Conread position: 262-673
Cow position: chr2:28793040-28793478 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 30

Conread position: 269-575
Cow position: chr2:52062461-52062770 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 46

Conread position: 270-673
Cow position: chr2:13045910-13045475 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 275-554
Cow position: chr2:78762259-78762525 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 17, 10

Conread position: 277-673
Cow position: chr2:5813583-5813164 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 9

Conread position: 281-449
Cow position: chr2:4926370-4926197 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr2:282886-282608 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 281-555
Cow position: chr2:24146665-24146943 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 281-555
Cow position: chr2:44991490-44991213 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 5

Conread position: 281-555
Cow position: chr2:81256611-81256892 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 6

Conread position: 282-629
Cow position: chr2:5870552-5870183 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 74

Conread position: 285-437
Cow position: chr2:51990728-51990571 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 132

Conread position: 285-672
Cow position: chr2:51990446-51990027 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 132

Conread position: 296-466
Cow position: chr2:2184443-2184267 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 296-552
Cow position: chr2:39421392-39421652 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 181

Conread position: 296-554
Cow position: chr2:3324751-3324483 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-554
Cow position: chr2:57588509-57588773 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-668
Cow position: chr2:2412983-2412572 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr2:4403344-4402931 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 296-672
Cow position: chr2:10611813-10611408 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 131

Conread position: 296-672
Cow position: chr2:47038601-47038186 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 296-672
Cow position: chr2:57335009-57335424 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 301-554
Cow position: chr2:19011165-19011424 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 304-554
Cow position: chr2:2380929-2381184 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 113

Conread position: 304-673
Cow position: chr2:10732943-10732545 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 243

Conread position: 305-548
Cow position: chr2:50983400-50983152 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 123

Conread position: 305-554
Cow position: chr2:25030654-25030403 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 123

Conread position: 305-554
Cow position: chr2:28650403-28650150 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-555
Cow position: chr2:8118365-8118621 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 305-672
Cow position: chr2:9907735-9908141 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 308-673
Cow position: chr2:16900081-16900481 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 312-673
Cow position: chr2:80293118-80292723 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 328-555
Cow position: chr2:781588-781359 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 139

Conread position: 337-555
Cow position: chr2:16290196-16290420 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 340-555
Cow position: chr2:903893-904101 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 75

Conread position: 465-673
Cow position: chr2:41150614-41150847 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Show alignments to all cow chromosomes.