Cow genome map
| Conread name: | Ova1-OVRM10212B12 |
| Conread position: | 190-555 |
| Cow position: | chr7:7294431-7294066 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 12, 198 |
| Conread position: | 191-555 |
| Cow position: | chr7:4415603-4415977 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 264 |
| Conread position: | 191-555 |
| Cow position: | chr7:58993821-58994192 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 33 |
| Conread position: | 194-554 |
| Cow position: | chr7:48634668-48635034 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 196-430 |
| Cow position: | chr7:54644275-54644036 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 201-427 |
| Cow position: | chr7:39107677-39107443 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 89, 12 |
| Conread position: | 202-555 |
| Cow position: | chr7:29470713-29471055 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 20 |
| Conread position: | 203-384 |
| Cow position: | chr7:3155365-3155545 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 168, 14 |
| Conread position: | 203-663 |
| Cow position: | chr7:21310749-21311180 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 214-490 |
| Cow position: | chr7:59683537-59683810 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 157, 73 |
| Conread position: | 219-429 |
| Cow position: | chr7:1734528-1734311 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 132 |
| Conread position: | 231-438 |
| Cow position: | chr7:55280065-55279857 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 140, 48 |
| Conread position: | 233-555 |
| Cow position: | chr7:33073008-33072682 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 243-672 |
| Cow position: | chr7:25439787-25440258 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 250-553 |
| Cow position: | chr7:63951129-63950824 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 121, 19 |
| Conread position: | 254-555 |
| Cow position: | chr7:21127363-21127060 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 257-555 |
| Cow position: | chr7:10431115-10430820 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 24 |
| Conread position: | 257-555 |
| Cow position: | chr7:34149401-34149703 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 24 |
| Conread position: | 262-555 |
| Cow position: | chr7:46901772-46901478 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 269-555 |
| Cow position: | chr7:24057749-24058034 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 270-501 |
| Cow position: | chr7:54603167-54603402 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 100, 22 |
| Conread position: | 270-554 |
| Cow position: | chr7:33405926-33405638 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 31 |
| Conread position: | 270-555 |
| Cow position: | chr7:446315-446030 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 274-556 |
| Cow position: | chr7:68232257-68232538 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 13 |
| Conread position: | 281-540 |
| Cow position: | chr7:19924501-19924235 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-555 |
| Cow position: | chr7:5183731-5184007 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 5 |
| Conread position: | 281-555 |
| Cow position: | chr7:21929468-21929747 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 5 |
| Conread position: | 281-555 |
| Cow position: | chr7:27786946-27787233 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 5 |
| Conread position: | 281-673 |
| Cow position: | chr7:14139275-14138845 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-673 |
| Cow position: | chr7:34486240-34486664 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-673 |
| Cow position: | chr7:45948826-45948400 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-673 |
| Cow position: | chr7:67799177-67799584 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 282-673 |
| Cow position: | chr7:21234685-21234264 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 32 |
| Conread position: | 285-672 |
| Cow position: | chr7:20515450-20515028 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 356 |
| Conread position: | 296-554 |
| Cow position: | chr7:16539-16276 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 166 |
| Conread position: | 296-554 |
| Cow position: | chr7:21320489-21320753 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 296-554 |
| Cow position: | chr7:60463482-60463746 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 296-554 |
| Cow position: | chr7:61559546-61559810 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 296-668 |
| Cow position: | chr7:3300823-3300412 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 296-672 |
| Cow position: | chr7:11446889-11447305 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 299-555 |
| Cow position: | chr7:25250440-25250704 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 305-554 |
| Cow position: | chr7:20799104-20798842 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 305-672 |
| Cow position: | chr7:6648314-6647909 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 305-672 |
| Cow position: | chr7:7257535-7257922 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 66, 85 |
| Conread position: | 305-673 |
| Cow position: | chr7:55537572-55537170 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 122 |
| Conread position: | 308-554 |
| Cow position: | chr7:38536749-38537001 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 308-555 |
| Cow position: | chr7:29369941-29369695 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 337-672 |
| Cow position: | chr7:1450750-1451106 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 206 |
| Conread position: | 339-673 |
| Cow position: | chr7:525353-525725 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.