Cow genome map
| Conread name: | Ova1-OVRM10212B12 |
| Conread position: | 191-555 |
| Cow position: | chr8:42468162-42468507 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 178, 22 |
| Conread position: | 194-556 |
| Cow position: | chr8:47673581-47673944 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 100 |
| Conread position: | 202-673 |
| Cow position: | chr8:24419765-24419284 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 11 |
| Conread position: | 204-525 |
| Cow position: | chr8:61034587-61034257 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 208-555 |
| Cow position: | chr8:24874683-24874326 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 210-672 |
| Cow position: | chr8:42160975-42160490 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 275 |
| Conread position: | 213-473 |
| Cow position: | chr8:45692699-45692449 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 159, 48 |
| Conread position: | 213-555 |
| Cow position: | chr8:38606755-38606408 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 256 |
| Conread position: | 225-485 |
| Cow position: | chr8:12717426-12717682 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 35, 6 |
| Conread position: | 237-672 |
| Cow position: | chr8:1153849-1153374 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 243-446 |
| Cow position: | chr8:33430866-33431083 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 245-673 |
| Cow position: | chr8:3856539-3856078 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 248-555 |
| Cow position: | chr8:25522880-25523193 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 249-554 |
| Cow position: | chr8:8518113-8517799 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 250-554 |
| Cow position: | chr8:8556677-8556363 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 253-555 |
| Cow position: | chr8:45160590-45160283 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 257-555 |
| Cow position: | chr8:17311508-17311811 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 36 |
| Conread position: | 259-426 |
| Cow position: | chr8:45316613-45316440 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 262-663 |
| Cow position: | chr8:12449444-12449880 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 17 |
| Conread position: | 262-663 |
| Cow position: | chr8:25776177-25775740 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 7 |
| Conread position: | 262-672 |
| Cow position: | chr8:19050972-19051412 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 12 |
| Conread position: | 262-673 |
| Cow position: | chr8:4686889-4687339 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 54 |
| Conread position: | 270-533 |
| Cow position: | chr8:8229278-8229012 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 270-673 |
| Cow position: | chr8:46944416-46943971 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 274-554 |
| Cow position: | chr8:11821816-11822099 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 67 |
| Conread position: | 274-555 |
| Cow position: | chr8:11832204-11832495 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 18 |
| Conread position: | 281-532 |
| Cow position: | chr8:10743117-10742862 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 281-554 |
| Cow position: | chr8:33588887-33589165 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-555 |
| Cow position: | chr8:7161405-7161683 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-555 |
| Cow position: | chr8:11802333-11802612 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 281-555 |
| Cow position: | chr8:23771148-23771426 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-555 |
| Cow position: | chr8:39195704-39195423 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-555 |
| Cow position: | chr8:44244060-44243782 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 11 |
| Conread position: | 281-555 |
| Cow position: | chr8:47885534-47885813 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 281-673 |
| Cow position: | chr8:5016694-5017116 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-673 |
| Cow position: | chr8:14591389-14590965 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-673 |
| Cow position: | chr8:32319036-32318614 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-673 |
| Cow position: | chr8:36636031-36635605 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 281-673 |
| Cow position: | chr8:47661812-47661383 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 27 |
| Conread position: | 282-555 |
| Cow position: | chr8:42484426-42484704 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 33 |
| Conread position: | 285-554 |
| Cow position: | chr8:27578911-27579181 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 291-627 |
| Cow position: | chr8:51667773-51667427 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 333 |
| Conread position: | 296-663 |
| Cow position: | chr8:21158307-21157918 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 85 |
| Conread position: | 296-672 |
| Cow position: | chr8:2886271-2886684 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 118 |
| Conread position: | 296-672 |
| Cow position: | chr8:34348198-34348609 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 296-672 |
| Cow position: | chr8:37931611-37932026 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 301-668 |
| Cow position: | chr8:8315925-8315533 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 304-555 |
| Cow position: | chr8:24915808-24915550 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 305-554 |
| Cow position: | chr8:30891786-30891532 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 123 |
| Conread position: | 305-555 |
| Cow position: | chr8:19330271-19330527 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 193 |
| Conread position: | 305-668 |
| Cow position: | chr8:9735776-9736172 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 305-672 |
| Cow position: | chr8:32631498-32631092 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 311-673 |
| Cow position: | chr8:50994327-50994712 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 181 |
| Conread position: | 330-549 |
| Cow position: | chr8:34108403-34108631 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 172 |
Show alignments to all cow chromosomes.