Cow genome map
Conread name: | Ova1-OVRM10212B12 |
Conread position: | 187-555 |
Cow position: | chrX:6282772-6282406 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 138 |
Conread position: | 191-548 |
Cow position: | chrX:17667917-17667556 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 26 |
Conread position: | 191-555 |
Cow position: | chrX:22130275-22129895 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 33 |
Conread position: | 191-672 |
Cow position: | chrX:44387100-44387613 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 286 |
Conread position: | 193-555 |
Cow position: | chrX:18534470-18534814 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 31 |
Conread position: | 196-555 |
Cow position: | chrX:40246897-40246531 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 203-548 |
Cow position: | chrX:6250442-6250092 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 235 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 59, 41 |
Conread position: | 203-555 |
Cow position: | chrX:10417316-10416949 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 263 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 9, 20 |
Conread position: | 206-555 |
Cow position: | chrX:24112829-24112484 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 72 |
Conread position: | 210-432 |
Cow position: | chrX:16016679-16016452 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 157 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 79, 23 |
Conread position: | 213-555 |
Cow position: | chrX:2536458-2536103 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 213-663 |
Cow position: | chrX:13053030-13053490 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 85 |
Conread position: | 218-555 |
Cow position: | chrX:31081972-31082318 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 243 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 89, 7 |
Conread position: | 227-672 |
Cow position: | chrX:11464996-11464509 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 242-534 |
Cow position: | chrX:22814440-22814718 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 249-554 |
Cow position: | chrX:10531530-10531216 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 249-554 |
Cow position: | chrX:18219425-18219739 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 249-555 |
Cow position: | chrX:21829562-21829874 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 53 |
Conread position: | 251-536 |
Cow position: | chrX:5299181-5298893 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 35 |
Conread position: | 251-555 |
Cow position: | chrX:21058836-21059131 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 226 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 121, 14 |
Conread position: | 251-672 |
Cow position: | chrX:21490228-21490678 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 53 |
Conread position: | 251-673 |
Cow position: | chrX:22488222-22488641 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 302 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 7, 50 |
Conread position: | 251-673 |
Cow position: | chrX:29285478-29285934 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 222 |
Conread position: | 254-555 |
Cow position: | chrX:16699345-16699650 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 27 |
Conread position: | 254-663 |
Cow position: | chrX:30183849-30183434 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 27 |
Conread position: | 257-459 |
Cow position: | chrX:18954477-18954271 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 165 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 6, 32 |
Conread position: | 257-673 |
Cow position: | chrX:26528024-26528472 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 21 |
Conread position: | 261-555 |
Cow position: | chrX:20697045-20696756 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 201 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 90, 104 |
Conread position: | 262-555 |
Cow position: | chrX:2482584-2482286 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 20 |
Conread position: | 262-555 |
Cow position: | chrX:29096255-29096551 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 17 |
Conread position: | 266-477 |
Cow position: | chrX:28603397-28603190 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 166 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 105, 10 |
Conread position: | 266-554 |
Cow position: | chrX:30056707-30057002 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 10 |
Conread position: | 269-673 |
Cow position: | chrX:12478782-12479201 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 17 |
Conread position: | 270-554 |
Cow position: | chrX:23391538-23391250 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 12 |
Conread position: | 270-673 |
Cow position: | chrX:29794058-29793628 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 14 |
Conread position: | 275-668 |
Cow position: | chrX:1833883-1834307 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 65 |
Conread position: | 281-555 |
Cow position: | chrX:15127171-15126893 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 34 |
Conread position: | 281-555 |
Cow position: | chrX:23277091-23277368 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 8 |
Conread position: | 281-555 |
Cow position: | chrX:26767127-26766849 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 5 |
Conread position: | 281-673 |
Cow position: | chrX:21222999-21223420 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 34 |
Conread position: | 281-673 |
Cow position: | chrX:29853498-29853071 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 27 |
Conread position: | 282-554 |
Cow position: | chrX:16812531-16812254 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 239 |
Conread position: | 285-554 |
Cow position: | chrX:2562790-2562515 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 285-554 |
Cow position: | chrX:7751967-7752241 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 137 |
Conread position: | 285-554 |
Cow position: | chrX:12343023-12343296 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 163 |
Conread position: | 285-554 |
Cow position: | chrX:12353307-12353582 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 285-554 |
Cow position: | chrX:12654693-12654420 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 216 |
Conread position: | 285-554 |
Cow position: | chrX:12803797-12803523 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 253 |
Conread position: | 285-554 |
Cow position: | chrX:13398053-13397778 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 285-554 |
Cow position: | chrX:20359984-20359709 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 285-554 |
Cow position: | chrX:27426253-27425978 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 285-569 |
Cow position: | chrX:28585047-28585334 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 277 |
Conread position: | 285-672 |
Cow position: | chrX:13076630-13076204 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 285-672 |
Cow position: | chrX:13097204-13096778 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 286-673 |
Cow position: | chrX:26758530-26758117 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 29 |
Conread position: | 291-542 |
Cow position: | chrX:23019404-23019660 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 296-436 |
Cow position: | chrX:507325-507471 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 296-544 |
Cow position: | chrX:8454830-8455086 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 296-552 |
Cow position: | chrX:30055657-30055395 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 296-554 |
Cow position: | chrX:2101937-2102200 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 157 |
Conread position: | 296-554 |
Cow position: | chrX:2604126-2604390 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 296-569 |
Cow position: | chrX:9125433-9125717 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 210 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 74, 239 |
Conread position: | 296-575 |
Cow position: | chrX:17478444-17478159 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 179 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 296-663 |
Cow position: | chrX:21304448-21304041 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 296-672 |
Cow position: | chrX:5863476-5863887 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 206 |
Conread position: | 296-672 |
Cow position: | chrX:18659704-18659295 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 296-672 |
Cow position: | chrX:21340482-21340893 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 296-672 |
Cow position: | chrX:28634338-28633934 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 126 |
Conread position: | 296-672 |
Cow position: | chrX:31493498-31493911 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 296-672 |
Cow position: | chrX:37849093-37849506 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 101 |
Conread position: | 301-427 |
Cow position: | chrX:24136314-24136183 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 70, 113 |
Conread position: | 304-555 |
Cow position: | chrX:23041034-23040779 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 173 |
Conread position: | 305-443 |
Cow position: | chrX:31187159-31187015 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 305-494 |
Cow position: | chrX:29947794-29947989 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 151 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 305-550 |
Cow position: | chrX:31198534-31198785 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 305-554 |
Cow position: | chrX:5336399-5336144 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 305-554 |
Cow position: | chrX:7030273-7030526 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 117 |
Conread position: | 305-554 |
Cow position: | chrX:7093685-7093940 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 305-554 |
Cow position: | chrX:14594858-14595113 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 305-672 |
Cow position: | chrX:3421098-3420713 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 123 |
Conread position: | 305-672 |
Cow position: | chrX:20315968-20315569 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 82 |
Conread position: | 305-672 |
Cow position: | chrX:22525517-22525111 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 305-672 |
Cow position: | chrX:26400090-26399688 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 308-554 |
Cow position: | chrX:24089491-24089744 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 193 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 62, 171 |
Conread position: | 308-555 |
Cow position: | chrX:13413043-13412789 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 309-668 |
Cow position: | chrX:5323632-5323234 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 309-672 |
Cow position: | chrX:8588269-8588671 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 310-554 |
Cow position: | chrX:29950492-29950240 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 319-672 |
Cow position: | chrX:3376011-3375619 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 331-673 |
Cow position: | chrX:21589087-21589462 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 346 |
Conread position: | 337-548 |
Cow position: | chrX:5833312-5833095 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.