Cow genome map
| Conread name: | Ova1-OVRM10212F12 |
| Conread position: | 1-268 |
| Cow position: | chr13:31556020-31555741 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 67, 39 |
| Conread position: | 1-279 |
| Cow position: | chr13:34049460-34049754 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 86, 39 |
| Conread position: | 2-161 |
| Cow position: | chr13:34938188-34938343 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-165 |
| Cow position: | chr13:28670539-28670381 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 2-193 |
| Cow position: | chr13:11740159-11739972 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 174, 26 |
| Conread position: | 2-198 |
| Cow position: | chr13:32984627-32984425 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-199 |
| Cow position: | chr13:50110175-50110371 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 2-205 |
| Cow position: | chr13:13325644-13325854 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 2-205 |
| Cow position: | chr13:31733166-31732964 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-205 |
| Cow position: | chr13:34424485-34424687 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 38 |
| Conread position: | 2-218 |
| Cow position: | chr13:16254660-16254446 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 2-221 |
| Cow position: | chr13:6758692-6758917 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 2-269 |
| Cow position: | chr13:47229281-47228998 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-271 |
| Cow position: | chr13:9045492-9045770 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 96, 38 |
| Conread position: | 2-274 |
| Cow position: | chr13:6667410-6667125 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 38 |
| Conread position: | 2-274 |
| Cow position: | chr13:14178114-14177836 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 2-274 |
| Cow position: | chr13:15519783-15519514 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 180, 38 |
| Conread position: | 2-274 |
| Cow position: | chr13:15543264-15543548 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 180, 38 |
| Conread position: | 2-274 |
| Cow position: | chr13:21696975-21697259 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-274 |
| Cow position: | chr13:35757996-35758289 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-274 |
| Cow position: | chr13:43590055-43590337 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 179, 39 |
| Conread position: | 2-277 |
| Cow position: | chr13:32546104-32546400 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 5-233 |
| Cow position: | chr13:28262905-28263128 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 6-274 |
| Cow position: | chr13:57024425-57024700 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 34 |
| Conread position: | 40-208 |
| Cow position: | chr13:42276684-42276516 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 136, 43 |
| Conread position: | 74-268 |
| Cow position: | chr13:21908305-21908094 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
Show alignments to all cow chromosomes.