Cow genome map
| Conread name: | Ova1-OVRM10212F12 |
| Conread position: | 1-214 |
| Cow position: | chr3:79431836-79431626 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 174, 39 |
| Conread position: | 1-217 |
| Cow position: | chr3:49271244-49271028 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 40 |
| Conread position: | 1-218 |
| Cow position: | chr3:32612566-32612357 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 135, 40 |
| Conread position: | 1-218 |
| Cow position: | chr3:37625866-37626080 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 180, 39 |
| Conread position: | 1-271 |
| Cow position: | chr3:64822975-64823251 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 219, 31 |
| Conread position: | 1-273 |
| Cow position: | chr3:46346956-46346681 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 97, 40 |
| Conread position: | 1-274 |
| Cow position: | chr3:648642-648380 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 17 |
| Conread position: | 1-277 |
| Cow position: | chr3:52653777-52653490 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 31 |
| Conread position: | 2-165 |
| Cow position: | chr3:20381413-20381574 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-198 |
| Cow position: | chr3:46016916-46017108 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 102, 38 |
| Conread position: | 2-205 |
| Cow position: | chr3:47080542-47080342 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 179, 37 |
| Conread position: | 2-218 |
| Cow position: | chr3:40342991-40343207 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 89, 41 |
| Conread position: | 2-218 |
| Cow position: | chr3:64356924-64356717 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-231 |
| Cow position: | chr3:63002673-63002445 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 2-268 |
| Cow position: | chr3:64027256-64026991 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 159, 38 |
| Conread position: | 2-271 |
| Cow position: | chr3:18860283-18860564 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-271 |
| Cow position: | chr3:19800306-19800025 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-271 |
| Cow position: | chr3:37969912-37970193 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-271 |
| Cow position: | chr3:54771733-54772002 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 164, 39 |
| Conread position: | 2-271 |
| Cow position: | chr3:74058408-74058678 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 38 |
| Conread position: | 2-274 |
| Cow position: | chr3:19756078-19755782 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 2-274 |
| Cow position: | chr3:21181830-21181544 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 173, 38 |
| Conread position: | 2-274 |
| Cow position: | chr3:49136690-49136419 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 168, 38 |
| Conread position: | 2-274 |
| Cow position: | chr3:70888010-70888290 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 3-199 |
| Cow position: | chr3:48229610-48229410 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 3-266 |
| Cow position: | chr3:42052286-42052017 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 157, 23 |
| Conread position: | 10-274 |
| Cow position: | chr3:63200487-63200761 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 120, 29 |
| Conread position: | 17-204 |
| Cow position: | chr3:55892296-55892484 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 145, 24 |
| Conread position: | 32-277 |
| Cow position: | chr3:37953099-37952843 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 37-270 |
| Cow position: | chr3:19879557-19879792 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 183 |
| Conread position: | 52-213 |
| Cow position: | chr3:78909247-78909085 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 124, 47 |
Show alignments to all cow chromosomes.