Cow genome map
| Conread name: | Ova1-OVRM10212F12 |
| Conread position: | 1-213 |
| Cow position: | chr4:44647452-44647244 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 133, 22 |
| Conread position: | 1-223 |
| Cow position: | chr4:22474025-22474244 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 173, 39 |
| Conread position: | 1-274 |
| Cow position: | chr4:493930-493644 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-274 |
| Cow position: | chr4:967404-967118 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 39 |
| Conread position: | 1-274 |
| Cow position: | chr4:6206270-6206564 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 1-274 |
| Cow position: | chr4:20604400-20604688 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 80, 39 |
| Conread position: | 1-276 |
| Cow position: | chr4:4177946-4178217 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 89, 39 |
| Conread position: | 2-203 |
| Cow position: | chr4:159835-160037 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-205 |
| Cow position: | chr4:1929966-1929764 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-205 |
| Cow position: | chr4:16057355-16057557 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 2-205 |
| Cow position: | chr4:17093189-17092988 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-205 |
| Cow position: | chr4:27334390-27334592 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-205 |
| Cow position: | chr4:45527518-45527718 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 174, 38 |
| Conread position: | 2-206 |
| Cow position: | chr4:33072143-33071940 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 131, 38 |
| Conread position: | 2-213 |
| Cow position: | chr4:27294642-27294434 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 163, 38 |
| Conread position: | 2-273 |
| Cow position: | chr4:5444159-5443874 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-274 |
| Cow position: | chr4:1049587-1049301 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-274 |
| Cow position: | chr4:36897050-36897333 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 96, 38 |
| Conread position: | 2-278 |
| Cow position: | chr4:6489686-6489399 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 199, 38 |
| Conread position: | 3-225 |
| Cow position: | chr4:39270724-39270501 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 151, 37 |
| Conread position: | 4-271 |
| Cow position: | chr4:50975312-50975582 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 4-274 |
| Cow position: | chr4:45106137-45106419 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 4-274 |
| Cow position: | chr4:45298406-45298142 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 74, 36 |
| Conread position: | 5-277 |
| Cow position: | chr4:38930084-38930368 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 121, 23 |
| Conread position: | 14-205 |
| Cow position: | chr4:530088-530281 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 17-205 |
| Cow position: | chr4:3126488-3126681 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 37-274 |
| Cow position: | chr4:14776162-14776409 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 40, 58 |
| Conread position: | 46-205 |
| Cow position: | chr4:20181757-20181918 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
Show alignments to all cow chromosomes.