Cow genome map
| Conread name: | Ova1-OVRM10212F12 |
| Conread position: | 1-131 |
| Cow position: | chr6:56042807-56042678 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 1-218 |
| Cow position: | chr6:17244488-17244285 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-274 |
| Cow position: | chr6:7834427-7834713 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 1-276 |
| Cow position: | chr6:18973496-18973220 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 2-197 |
| Cow position: | chr6:6567503-6567693 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-202 |
| Cow position: | chr6:13310447-13310245 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 75, 38 |
| Conread position: | 2-204 |
| Cow position: | chr6:17597398-17597193 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 39 |
| Conread position: | 2-205 |
| Cow position: | chr6:12665406-12665203 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 145, 38 |
| Conread position: | 2-205 |
| Cow position: | chr6:13104971-13105175 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-205 |
| Cow position: | chr6:28169817-28170016 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 149, 38 |
| Conread position: | 2-205 |
| Cow position: | chr6:40866411-40866209 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-205 |
| Cow position: | chr6:43999974-44000176 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-205 |
| Cow position: | chr6:44149643-44149442 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-246 |
| Cow position: | chr6:38271802-38272050 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 193, 38 |
| Conread position: | 2-268 |
| Cow position: | chr6:10632469-10632737 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 163, 38 |
| Conread position: | 2-274 |
| Cow position: | chr6:8203096-8203374 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-274 |
| Cow position: | chr6:20560189-20559906 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 179, 40 |
| Conread position: | 2-274 |
| Cow position: | chr6:58601393-58601679 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-279 |
| Cow position: | chr6:3276461-3276170 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 3-158 |
| Cow position: | chr6:31565244-31565090 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 139, 37 |
| Conread position: | 3-205 |
| Cow position: | chr6:11871732-11871531 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 178, 37 |
| Conread position: | 3-268 |
| Cow position: | chr6:31636500-31636229 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 4-276 |
| Cow position: | chr6:60931601-60931886 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 102, 35 |
| Conread position: | 14-274 |
| Cow position: | chr6:68027852-68028112 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 148, 26 |
| Conread position: | 18-205 |
| Cow position: | chr6:330534-330350 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 35-218 |
| Cow position: | chr6:44550218-44550035 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 126, 48 |
| Conread position: | 37-203 |
| Cow position: | chr6:26669916-26669750 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 144, 45 |
Show alignments to all cow chromosomes.