Cow genome map
| Conread name: | Ova1-OVRM10212F12 |
| Conread position: | 1-218 |
| Cow position: | chr7:1403456-1403243 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 183, 39 |
| Conread position: | 1-268 |
| Cow position: | chr7:40268966-40268691 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 1-271 |
| Cow position: | chr7:19046731-19046452 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 135, 47 |
| Conread position: | 1-273 |
| Cow position: | chr7:20212064-20211781 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 172, 110 |
| Conread position: | 1-274 |
| Cow position: | chr7:20532964-20533237 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 175, 39 |
| Conread position: | 1-274 |
| Cow position: | chr7:63386731-63387022 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 1-278 |
| Cow position: | chr7:25135865-25136152 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 2-199 |
| Cow position: | chr7:20798438-20798242 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 9 |
| Conread position: | 2-199 |
| Cow position: | chr7:39097503-39097306 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 163, 38 |
| Conread position: | 2-204 |
| Cow position: | chr7:34150308-34150511 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 2-205 |
| Cow position: | chr7:5261920-5261718 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 179, 16 |
| Conread position: | 2-205 |
| Cow position: | chr7:11447563-11447770 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-205 |
| Cow position: | chr7:27101291-27101084 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 78, 38 |
| Conread position: | 2-205 |
| Cow position: | chr7:29471463-29471670 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 163, 38 |
| Conread position: | 2-232 |
| Cow position: | chr7:33332564-33332794 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 174, 38 |
| Conread position: | 2-241 |
| Cow position: | chr7:42871145-42871384 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 75, 38 |
| Conread position: | 2-268 |
| Cow position: | chr7:525980-526253 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 98, 38 |
| Conread position: | 2-274 |
| Cow position: | chr7:5309109-5308826 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-274 |
| Cow position: | chr7:21986430-21986705 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-274 |
| Cow position: | chr7:29369021-29368737 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 75, 38 |
| Conread position: | 2-274 |
| Cow position: | chr7:34486920-34487202 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-274 |
| Cow position: | chr7:38397819-38398104 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 163, 38 |
| Conread position: | 2-274 |
| Cow position: | chr7:39792774-39793057 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 199, 38 |
| Conread position: | 2-274 |
| Cow position: | chr7:66905724-66906010 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-277 |
| Cow position: | chr7:3156473-3156759 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 131, 38 |
| Conread position: | 2-277 |
| Cow position: | chr7:23837575-23837866 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 126, 39 |
| Conread position: | 3-187 |
| Cow position: | chr7:63555947-63556130 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 159, 37 |
| Conread position: | 3-219 |
| Cow position: | chr7:57564094-57563878 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 82, 31 |
| Conread position: | 3-261 |
| Cow position: | chr7:59466957-59466696 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 153, 37 |
| Conread position: | 4-218 |
| Cow position: | chr7:68333950-68334162 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 158, 36 |
| Conread position: | 32-213 |
| Cow position: | chr7:59679879-59680068 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 101 |
| Conread position: | 33-274 |
| Cow position: | chr7:67813539-67813790 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 138, 115 |
| Conread position: | 37-205 |
| Cow position: | chr7:48805700-48805527 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 37-282 |
| Cow position: | chr7:24058490-24058744 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 125, 35 |
| Conread position: | 51-268 |
| Cow position: | chr7:59940248-59940486 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 56-218 |
| Cow position: | chr7:59138703-59138863 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 106, 33 |
| Conread position: | 57-278 |
| Cow position: | chr7:57211220-57211443 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 21, 151 |
Show alignments to all cow chromosomes.