Cow genome map
| Conread name: | Ova1-OVRM10212F12 |
| Conread position: | 1-203 |
| Cow position: | chrX:18553177-18553378 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 173, 40 |
| Conread position: | 1-204 |
| Cow position: | chrX:24476449-24476243 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 101, 42 |
| Conread position: | 1-205 |
| Cow position: | chrX:21732015-21731810 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 163, 27 |
| Conread position: | 1-218 |
| Cow position: | chrX:8574730-8574527 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 129, 39 |
| Conread position: | 1-223 |
| Cow position: | chrX:29778761-29778543 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 175, 39 |
| Conread position: | 1-250 |
| Cow position: | chrX:4797072-4797314 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 180, 39 |
| Conread position: | 1-271 |
| Cow position: | chrX:2011949-2011672 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 175, 39 |
| Conread position: | 1-274 |
| Cow position: | chrX:10416710-10416420 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 107, 39 |
| Conread position: | 1-274 |
| Cow position: | chrX:26426818-26426550 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 174, 10 |
| Conread position: | 1-274 |
| Cow position: | chrX:26999335-26999612 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 95, 10 |
| Conread position: | 1-315 |
| Cow position: | chrX:23213600-23213295 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 165, 40 |
| Conread position: | 2-201 |
| Cow position: | chrX:6282010-6281808 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 90, 39 |
| Conread position: | 2-201 |
| Cow position: | chrX:38890742-38890939 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 132, 38 |
| Conread position: | 2-204 |
| Cow position: | chrX:13053755-13053956 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 2-205 |
| Cow position: | chrX:6872324-6872120 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-205 |
| Cow position: | chrX:8588913-8589112 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-205 |
| Cow position: | chrX:11148586-11148385 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-205 |
| Cow position: | chrX:12343684-12343886 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-205 |
| Cow position: | chrX:15623749-15623550 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-205 |
| Cow position: | chrX:18659039-18658841 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 179, 38 |
| Conread position: | 2-205 |
| Cow position: | chrX:29910676-29910479 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 182, 38 |
| Conread position: | 2-205 |
| Cow position: | chrX:32066416-32066217 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-213 |
| Cow position: | chrX:28650805-28650595 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-221 |
| Cow position: | chrX:5304902-5305122 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 89, 76 |
| Conread position: | 2-223 |
| Cow position: | chrX:674456-674234 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-268 |
| Cow position: | chrX:37812911-37813178 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-271 |
| Cow position: | chrX:2577170-2577455 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 79, 38 |
| Conread position: | 2-274 |
| Cow position: | chrX:971524-971812 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 38 |
| Conread position: | 2-274 |
| Cow position: | chrX:12315007-12314719 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 2-274 |
| Cow position: | chrX:13416685-13416400 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 128, 37 |
| Conread position: | 2-279 |
| Cow position: | chrX:22618549-22618273 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 160, 38 |
| Conread position: | 3-213 |
| Cow position: | chrX:25612807-25613006 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 171, 21 |
| Conread position: | 3-218 |
| Cow position: | chrX:20798071-20798284 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 48 |
| Conread position: | 4-169 |
| Cow position: | chrX:33707185-33707348 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 4-274 |
| Cow position: | chrX:41102715-41102434 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 171, 26 |
| Conread position: | 5-274 |
| Cow position: | chrX:23020081-23020341 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 176, 35 |
| Conread position: | 8-199 |
| Cow position: | chrX:27006250-27006438 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 166, 10 |
| Conread position: | 14-274 |
| Cow position: | chrX:35940489-35940230 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 26 |
| Conread position: | 14-279 |
| Cow position: | chrX:3467875-3467609 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 17-268 |
| Cow position: | chrX:35530627-35530879 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 37-205 |
| Cow position: | chrX:1834601-1834768 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 145, 40 |
| Conread position: | 37-218 |
| Cow position: | chrX:13182344-13182163 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 46-274 |
| Cow position: | chrX:28868448-28868213 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 42 |
| Conread position: | 55-245 |
| Cow position: | chrX:6249678-6249488 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 111, 166 |
Show alignments to all cow chromosomes.