Cow genome map
| Conread name: | Ova1-OVRM10217E10 |
| Conread position: | 1-233 |
| Cow position: | chr1:42174517-42174753 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 77, 154 |
| Conread position: | 1-299 |
| Cow position: | chr1:34892630-34892339 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 117, 72 |
| Conread position: | 1-303 |
| Cow position: | chr1:54162733-54163041 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 153 |
| Conread position: | 1-312 |
| Cow position: | chr1:28284647-28284334 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 77, 156 |
| Conread position: | 1-327 |
| Cow position: | chr1:86325534-86325866 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 69, 154 |
| Conread position: | 1-340 |
| Cow position: | chr1:64479903-64480245 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 277 |
| Conread position: | 1-348 |
| Cow position: | chr1:64099206-64099539 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 81 |
| Conread position: | 1-358 |
| Cow position: | chr1:59910425-59910064 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 78, 152 |
| Conread position: | 1-362 |
| Cow position: | chr1:1825853-1825489 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 68, 196 |
| Conread position: | 1-421 |
| Cow position: | chr1:17291567-17291989 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 159 |
| Conread position: | 1-424 |
| Cow position: | chr1:18223797-18224234 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 160 |
| Conread position: | 1-437 |
| Cow position: | chr1:22516616-22516185 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 136 |
| Conread position: | 1-438 |
| Cow position: | chr1:52206751-52206326 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 145 |
| Conread position: | 1-443 |
| Cow position: | chr1:72181876-72181468 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 40 |
| Conread position: | 1-444 |
| Cow position: | chr1:23624234-23623779 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 88 |
| Conread position: | 2-426 |
| Cow position: | chr1:30041807-30041375 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 317 |
| Conread position: | 3-307 |
| Cow position: | chr1:25886005-25886310 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 3-443 |
| Cow position: | chr1:92048892-92048459 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 308 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 161, 68 |
| Conread position: | 11-311 |
| Cow position: | chr1:29648345-29648643 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 60, 138 |
| Conread position: | 16-438 |
| Cow position: | chr1:31377883-31378292 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 54 |
| Conread position: | 18-371 |
| Cow position: | chr1:11323428-11323785 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 60, 113 |
| Conread position: | 32-442 |
| Cow position: | chr1:82406509-82406928 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 126 |
| Conread position: | 36-444 |
| Cow position: | chr1:60120458-60120056 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 57-353 |
| Cow position: | chr1:635203-634908 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 70-443 |
| Cow position: | chr1:22729045-22728676 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 13 |
| Conread position: | 71-428 |
| Cow position: | chr1:55202632-55202989 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 130, 17 |
| Conread position: | 76-310 |
| Cow position: | chr1:64189485-64189264 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 126, 7 |
| Conread position: | 76-367 |
| Cow position: | chr1:61176175-61175886 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 82 |
| Conread position: | 76-432 |
| Cow position: | chr1:10719495-10719850 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 20 |
| Conread position: | 78-330 |
| Cow position: | chr1:45535692-45535444 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 78-351 |
| Cow position: | chr1:32341221-32341488 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 78-420 |
| Cow position: | chr1:96478684-96478333 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 95, 76 |
| Conread position: | 78-432 |
| Cow position: | chr1:91816786-91817131 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 26 |
| Conread position: | 79-330 |
| Cow position: | chr1:29975615-29975855 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 79-428 |
| Cow position: | chr1:6794937-6795288 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 252 |
| Conread position: | 80-322 |
| Cow position: | chr1:28567450-28567688 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 121, 7 |
| Conread position: | 80-443 |
| Cow position: | chr1:84255750-84255385 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 81-437 |
| Cow position: | chr1:7657329-7657684 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 66 |
| Conread position: | 82-336 |
| Cow position: | chr1:90423101-90423349 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 120, 65 |
| Conread position: | 82-423 |
| Cow position: | chr1:52774550-52774858 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 119, 50 |
| Conread position: | 83-329 |
| Cow position: | chr1:93110639-93110882 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 6 |
| Conread position: | 83-444 |
| Cow position: | chr1:67821227-67821592 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 88-330 |
| Cow position: | chr1:63905495-63905732 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 186, 59 |
| Conread position: | 105-358 |
| Cow position: | chr1:4385321-4385060 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 208-447 |
| Cow position: | chr1:54640151-54639909 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 66, 194 |
Show alignments to all cow chromosomes.