Cow genome map
| Conread name: | Ova1-OVRM10217E10 |
| Conread position: | 1-225 |
| Cow position: | chr15:27972331-27972563 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 156 |
| Conread position: | 1-301 |
| Cow position: | chr15:31655853-31655543 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 80, 24 |
| Conread position: | 1-312 |
| Cow position: | chr15:10581133-10580824 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 77, 155 |
| Conread position: | 1-321 |
| Cow position: | chr15:36278299-36278634 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 65 |
| Conread position: | 1-328 |
| Cow position: | chr15:28070523-28070839 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 62, 140 |
| Conread position: | 1-330 |
| Cow position: | chr15:21802144-21801817 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 80, 135 |
| Conread position: | 1-336 |
| Cow position: | chr15:44797553-44797886 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 58 |
| Conread position: | 1-397 |
| Cow position: | chr15:4623506-4623908 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 54 |
| Conread position: | 1-417 |
| Cow position: | chr15:40065667-40065257 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 145 |
| Conread position: | 1-438 |
| Cow position: | chr15:22713808-22713382 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 2-230 |
| Cow position: | chr15:16946795-16946565 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 76, 129 |
| Conread position: | 5-438 |
| Cow position: | chr15:9072412-9071969 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 160 |
| Conread position: | 6-194 |
| Cow position: | chr15:5912698-5912891 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 14-411 |
| Cow position: | chr15:37470243-37470625 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 279 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 146, 64 |
| Conread position: | 16-330 |
| Cow position: | chr15:19192902-19192590 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 31-387 |
| Cow position: | chr15:3832216-3832559 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 31-424 |
| Cow position: | chr15:25825803-25825409 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 96 |
| Conread position: | 33-443 |
| Cow position: | chr15:20351888-20352308 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 36-368 |
| Cow position: | chr15:45216889-45217216 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 207, 46 |
| Conread position: | 36-420 |
| Cow position: | chr15:34255671-34255299 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 174, 92 |
| Conread position: | 41-420 |
| Cow position: | chr15:6565381-6565024 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 271 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 67-347 |
| Cow position: | chr15:11011507-11011238 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 135, 80 |
| Conread position: | 75-338 |
| Cow position: | chr15:40009544-40009289 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 15 |
| Conread position: | 76-233 |
| Cow position: | chr15:17124926-17124773 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 79-252 |
| Cow position: | chr15:22854512-22854683 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 7, 69 |
| Conread position: | 79-316 |
| Cow position: | chr15:17213563-17213792 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 195, 10 |
| Conread position: | 83-259 |
| Cow position: | chr15:50993850-50994029 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 88-438 |
| Cow position: | chr15:35041756-35041415 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 59 |
| Conread position: | 91-376 |
| Cow position: | chr15:25584967-25584687 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 111, 56 |
| Conread position: | 92-443 |
| Cow position: | chr15:22532360-22532703 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 55 |
| Conread position: | 105-438 |
| Cow position: | chr15:24285116-24285448 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 42 |
| Conread position: | 105-443 |
| Cow position: | chr15:1128130-1128450 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 177-444 |
| Cow position: | chr15:4641223-4640952 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 25, 226 |
Show alignments to all cow chromosomes.