Cow genome map
| Conread name: | Ova1-OVRM10217E10 |
| Conread position: | 1-254 |
| Cow position: | chr21:34141055-34141312 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 77, 94 |
| Conread position: | 1-330 |
| Cow position: | chr21:6618866-6619177 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 1-427 |
| Cow position: | chr21:24944766-24945201 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 147 |
| Conread position: | 1-428 |
| Cow position: | chr21:37941554-37941981 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 124 |
| Conread position: | 1-431 |
| Cow position: | chr21:23499699-23500123 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 34 |
| Conread position: | 1-440 |
| Cow position: | chr21:23786161-23785717 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 154 |
| Conread position: | 2-395 |
| Cow position: | chr21:16166512-16166901 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 76 |
| Conread position: | 2-424 |
| Cow position: | chr21:30897543-30897128 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 23 |
| Conread position: | 7-330 |
| Cow position: | chr21:26614538-26614858 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 62, 150 |
| Conread position: | 12-443 |
| Cow position: | chr21:5597272-5596844 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 146 |
| Conread position: | 61-443 |
| Cow position: | chr21:11644911-11645301 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 213, 15 |
| Conread position: | 67-441 |
| Cow position: | chr21:30990223-30990580 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 67 |
| Conread position: | 71-438 |
| Cow position: | chr21:29069280-29069637 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 25 |
| Conread position: | 75-324 |
| Cow position: | chr21:42135573-42135819 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 75-438 |
| Cow position: | chr21:29943050-29942693 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 73 |
| Conread position: | 76-321 |
| Cow position: | chr21:45850668-45850902 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 126, 9 |
| Conread position: | 76-388 |
| Cow position: | chr21:13034997-13035310 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 77-350 |
| Cow position: | chr21:10866923-10866652 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 12 |
| Conread position: | 78-432 |
| Cow position: | chr21:40786722-40786368 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 98 |
| Conread position: | 78-442 |
| Cow position: | chr21:19363420-19363765 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 195, 23 |
| Conread position: | 80-229 |
| Cow position: | chr21:32904116-32904258 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 10 |
| Conread position: | 81-443 |
| Cow position: | chr21:82121-81754 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 67 |
| Conread position: | 82-443 |
| Cow position: | chr21:44331254-44331601 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 49 |
| Conread position: | 83-328 |
| Cow position: | chr21:31764091-31764335 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 88-432 |
| Cow position: | chr21:48484411-48484743 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 9, 65 |
| Conread position: | 92-255 |
| Cow position: | chr21:37886440-37886285 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 109, 55 |
| Conread position: | 92-438 |
| Cow position: | chr21:28512558-28512232 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 13 |
| Conread position: | 98-336 |
| Cow position: | chr21:24714681-24714447 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 104, 118 |
| Conread position: | 117-328 |
| Cow position: | chr21:41579761-41579552 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 141-443 |
| Cow position: | chr21:20910108-20910425 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 9 |
Show alignments to all cow chromosomes.