Cow genome map
| Conread name: | Ova1-OVRM10217E10 |
| Conread position: | 1-277 |
| Cow position: | chr3:82703569-82703292 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 75, 155 |
| Conread position: | 1-284 |
| Cow position: | chr3:80928900-80929193 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 77, 141 |
| Conread position: | 1-299 |
| Cow position: | chr3:3690682-3690980 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 76, 139 |
| Conread position: | 1-324 |
| Cow position: | chr3:42594611-42594938 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 128 |
| Conread position: | 1-330 |
| Cow position: | chr3:73417556-73417234 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 1-428 |
| Cow position: | chr3:84153359-84152929 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 110 |
| Conread position: | 1-438 |
| Cow position: | chr3:24531864-24531443 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 14 |
| Conread position: | 1-441 |
| Cow position: | chr3:60174445-60174878 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 116 |
| Conread position: | 1-443 |
| Cow position: | chr3:20471323-20471767 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 128 |
| Conread position: | 1-443 |
| Cow position: | chr3:67044056-67044496 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 48 |
| Conread position: | 1-443 |
| Cow position: | chr3:78546073-78546498 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 76 |
| Conread position: | 2-322 |
| Cow position: | chr3:23478267-23477955 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 76, 122 |
| Conread position: | 2-331 |
| Cow position: | chr3:60854810-60855127 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 3-228 |
| Cow position: | chr3:56711600-56711833 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 69, 155 |
| Conread position: | 3-428 |
| Cow position: | chr3:8753499-8753078 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 75 |
| Conread position: | 3-438 |
| Cow position: | chr3:42489262-42489711 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 154 |
| Conread position: | 6-438 |
| Cow position: | chr3:55460460-55460891 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 147 |
| Conread position: | 11-255 |
| Cow position: | chr3:61009404-61009648 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 12-305 |
| Cow position: | chr3:11357623-11357907 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 82, 13 |
| Conread position: | 14-330 |
| Cow position: | chr3:58131026-58130712 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 130 |
| Conread position: | 16-213 |
| Cow position: | chr3:42490437-42490643 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 141 |
| Conread position: | 32-331 |
| Cow position: | chr3:23111502-23111793 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 167, 115 |
| Conread position: | 32-362 |
| Cow position: | chr3:77225129-77224792 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 67-396 |
| Cow position: | chr3:53150294-53149970 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 11 |
| Conread position: | 68-324 |
| Cow position: | chr3:81473975-81473722 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 22 |
| Conread position: | 68-438 |
| Cow position: | chr3:43657744-43658111 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 134, 17 |
| Conread position: | 73-432 |
| Cow position: | chr3:31501312-31500965 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 129, 57 |
| Conread position: | 76-300 |
| Cow position: | chr3:54881717-54881498 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 198, 11 |
| Conread position: | 78-399 |
| Cow position: | chr3:34315999-34316337 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 71 |
| Conread position: | 79-326 |
| Cow position: | chr3:8457611-8457373 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 15, 68 |
| Conread position: | 81-307 |
| Cow position: | chr3:49337676-49337465 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 120, 13 |
| Conread position: | 86-324 |
| Cow position: | chr3:36100784-36100546 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 90-320 |
| Cow position: | chr3:32399310-32399533 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 184, 57 |
| Conread position: | 92-317 |
| Cow position: | chr3:7331170-7331394 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 110, 55 |
| Conread position: | 94-354 |
| Cow position: | chr3:23092037-23092300 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 108, 53 |
| Conread position: | 105-330 |
| Cow position: | chr3:36032608-36032394 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 96, 39 |
Show alignments to all cow chromosomes.