Cow genome map
| Conread name: | Ova1-OVRM10217E10 |
| Conread position: | 1-161 |
| Cow position: | chr4:41975659-41975828 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 160 |
| Conread position: | 1-251 |
| Cow position: | chr4:8597635-8597886 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 80, 138 |
| Conread position: | 1-264 |
| Cow position: | chr4:47511079-47510812 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 49, 54 |
| Conread position: | 1-308 |
| Cow position: | chr4:59565590-59565290 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 1-313 |
| Cow position: | chr4:58433161-58433466 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 135 |
| Conread position: | 1-324 |
| Cow position: | chr4:9822205-9821890 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 83 |
| Conread position: | 1-330 |
| Cow position: | chr4:32749257-32748923 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 151 |
| Conread position: | 1-330 |
| Cow position: | chr4:45114550-45114878 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 15 |
| Conread position: | 1-410 |
| Cow position: | chr4:53763067-53763467 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 103 |
| Conread position: | 1-421 |
| Cow position: | chr4:5623143-5623568 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 153 |
| Conread position: | 1-428 |
| Cow position: | chr4:5188955-5189365 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 1-438 |
| Cow position: | chr4:58856697-58857114 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 28 |
| Conread position: | 2-308 |
| Cow position: | chr4:57652296-57652003 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 176, 78 |
| Conread position: | 2-422 |
| Cow position: | chr4:15283423-15282999 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 10-420 |
| Cow position: | chr4:61191516-61191110 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 287 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 60, 68 |
| Conread position: | 13-292 |
| Cow position: | chr4:52597432-52597716 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 65, 141 |
| Conread position: | 16-236 |
| Cow position: | chr4:21162712-21162488 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 145 |
| Conread position: | 16-389 |
| Cow position: | chr4:45240318-45239943 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 142 |
| Conread position: | 22-326 |
| Cow position: | chr4:51407932-51408234 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 23-269 |
| Cow position: | chr4:61171941-61171693 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 90 |
| Conread position: | 42-443 |
| Cow position: | chr4:61271620-61272016 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 57-397 |
| Cow position: | chr4:19265571-19265232 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 67-284 |
| Cow position: | chr4:56591028-56590804 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 68-304 |
| Cow position: | chr4:13406687-13406459 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 69-443 |
| Cow position: | chr4:19097270-19096910 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 71-438 |
| Cow position: | chr4:33433284-33433636 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 71-443 |
| Cow position: | chr4:24001989-24002356 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 12 |
| Conread position: | 76-438 |
| Cow position: | chr4:65825870-65826245 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 78-293 |
| Cow position: | chr4:19463468-19463255 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 25, 8 |
| Conread position: | 78-443 |
| Cow position: | chr4:19584688-19584317 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 12 |
| Conread position: | 89-324 |
| Cow position: | chr4:23847085-23847317 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 153-315 |
| Cow position: | chr4:20926256-20926416 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 48, 19 |
Show alignments to all cow chromosomes.