Cow genome map
| Conread name: | Ova1-OVRM10217E10 |
| Conread position: | 1-326 |
| Cow position: | chr6:27710753-27710434 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 129 |
| Conread position: | 1-326 |
| Cow position: | chr6:55935872-55936197 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 130 |
| Conread position: | 1-330 |
| Cow position: | chr6:20172331-20171996 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 157 |
| Conread position: | 1-331 |
| Cow position: | chr6:29084101-29084451 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 77, 146 |
| Conread position: | 1-428 |
| Cow position: | chr6:3017555-3017116 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 150 |
| Conread position: | 1-428 |
| Cow position: | chr6:45617328-45617762 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 156 |
| Conread position: | 1-434 |
| Cow position: | chr6:10423273-10422836 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 1-438 |
| Cow position: | chr6:11159898-11160350 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 154 |
| Conread position: | 1-438 |
| Cow position: | chr6:29077840-29077396 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 136 |
| Conread position: | 1-445 |
| Cow position: | chr6:23891662-23891206 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 157 |
| Conread position: | 2-271 |
| Cow position: | chr6:4666692-4666950 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 103 |
| Conread position: | 2-443 |
| Cow position: | chr6:51071812-51071365 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 74 |
| Conread position: | 3-315 |
| Cow position: | chr6:44377373-44377056 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 149 |
| Conread position: | 3-370 |
| Cow position: | chr6:59276839-59277207 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 115 |
| Conread position: | 3-438 |
| Cow position: | chr6:58594000-58594444 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 157 |
| Conread position: | 6-438 |
| Cow position: | chr6:41557569-41557150 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 11-443 |
| Cow position: | chr6:13592804-13592390 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 312 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 12-326 |
| Cow position: | chr6:11382876-11383185 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 152 |
| Conread position: | 16-227 |
| Cow position: | chr6:52602165-52602368 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 70 |
| Conread position: | 67-428 |
| Cow position: | chr6:561656-561297 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 68-314 |
| Cow position: | chr6:24223129-24223371 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 113, 27 |
| Conread position: | 68-412 |
| Cow position: | chr6:6722130-6721814 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 133, 14 |
| Conread position: | 78-330 |
| Cow position: | chr6:67304824-67304577 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 81 |
| Conread position: | 79-324 |
| Cow position: | chr6:10254260-10254023 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 79-443 |
| Cow position: | chr6:60930880-60931237 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 11 |
| Conread position: | 80-324 |
| Cow position: | chr6:1907557-1907320 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 121, 10 |
| Conread position: | 83-437 |
| Cow position: | chr6:46292329-46292664 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 77 |
| Conread position: | 94-313 |
| Cow position: | chr6:54864666-54864874 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 57 |
| Conread position: | 95-443 |
| Cow position: | chr6:63197162-63197507 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 81 |
Show alignments to all cow chromosomes.