Cow genome map
| Conread name: | Ova1-OVRM10217E10 |
| Conread position: | 1-251 |
| Cow position: | chrX:23254112-23254372 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 80, 156 |
| Conread position: | 1-309 |
| Cow position: | chrX:2186353-2186041 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 44, 162 |
| Conread position: | 1-317 |
| Cow position: | chrX:35926049-35925742 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 151 |
| Conread position: | 1-318 |
| Cow position: | chrX:13245690-13245365 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 157 |
| Conread position: | 1-419 |
| Cow position: | chrX:25338280-25337850 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 55 |
| Conread position: | 1-437 |
| Cow position: | chrX:11675158-11674713 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 146 |
| Conread position: | 1-438 |
| Cow position: | chrX:9910678-9911117 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 273, 55 |
| Conread position: | 1-438 |
| Cow position: | chrX:11982230-11981775 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 2-322 |
| Cow position: | chrX:3147293-3146966 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 76, 152 |
| Conread position: | 2-365 |
| Cow position: | chrX:21816360-21815985 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 271 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 15, 148 |
| Conread position: | 2-441 |
| Cow position: | chrX:24201273-24200849 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 56 |
| Conread position: | 3-444 |
| Cow position: | chrX:25848995-25848562 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 5-309 |
| Cow position: | chrX:12688997-12689289 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 79 |
| Conread position: | 7-438 |
| Cow position: | chrX:2147431-2146972 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 37 |
| Conread position: | 32-253 |
| Cow position: | chrX:38999917-38999682 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 56-432 |
| Cow position: | chrX:40826720-40827087 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 21, 34 |
| Conread position: | 57-317 |
| Cow position: | chrX:21642452-21642703 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 145, 22 |
| Conread position: | 67-356 |
| Cow position: | chrX:17725995-17725712 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 68-331 |
| Cow position: | chrX:40789224-40788964 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 123, 15 |
| Conread position: | 69-435 |
| Cow position: | chrX:40557663-40558019 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 71-410 |
| Cow position: | chrX:12826761-12826429 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 72-389 |
| Cow position: | chrX:35273368-35273045 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 130, 75 |
| Conread position: | 75-312 |
| Cow position: | chrX:281134-280914 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 28, 43 |
| Conread position: | 76-311 |
| Cow position: | chrX:20791810-20792037 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 76-330 |
| Cow position: | chrX:6563530-6563274 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 126, 71 |
| Conread position: | 76-331 |
| Cow position: | chrX:30862320-30862063 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 78-326 |
| Cow position: | chrX:13382337-13382090 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 124, 73 |
| Conread position: | 78-438 |
| Cow position: | chrX:31250394-31250046 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 69 |
| Conread position: | 78-443 |
| Cow position: | chrX:1616035-1616404 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 71 |
| Conread position: | 79-332 |
| Cow position: | chrX:40035436-40035693 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 69 |
| Conread position: | 79-395 |
| Cow position: | chrX:45414295-45414605 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 123, 7 |
| Conread position: | 81-443 |
| Cow position: | chrX:40269492-40269123 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 70 |
| Conread position: | 83-321 |
| Cow position: | chrX:10959394-10959631 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 6, 69 |
| Conread position: | 86-443 |
| Cow position: | chrX:14883959-14884315 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 65 |
| Conread position: | 89-443 |
| Cow position: | chrX:35387906-35388260 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 16 |
Show alignments to all cow chromosomes.