Cow genome map


           Conread name:
           Ova1-OVRM10223G06
        

               Conread position:
               2-219
               

               Cow position:
               chr1:86510367-86510577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               36, 77
               

               Conread position:
               5-231
               

               Cow position:
               chr1:7636071-7636298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 135
               

               Conread position:
               6-145
               

               Cow position:
               chr1:86002572-86002432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               32, 75
               

               Conread position:
               6-224
               

               Cow position:
               chr1:70312051-70312270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               32, 78
               

               Conread position:
               17-197
               

               Cow position:
               chr1:64761586-64761403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               18-225
               

               Cow position:
               chr1:49605856-49606065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               19, 133
               

               Conread position:
               23-225
               

               Cow position:
               chr1:66504515-66504725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 148
               

               Conread position:
               45-225
               

               Cow position:
               chr1:42771964-42771784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 73
               

               Conread position:
               46-243
               

               Cow position:
               chr1:40067746-40067550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               80, 30
               

               Conread position:
               285-554
               

               Cow position:
               chr1:57928758-57928504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               50, 67
               

               Conread position:
               296-650
               

               Cow position:
               chr1:21133971-21133603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               91, 77
               

               Conread position:
               393-664
               

               Cow position:
               chr1:86001651-86001387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 58
               
Show alignments to all cow chromosomes.