Cow genome map
| Conread name: | Ovi1-UMC-pd3ov4-004-c08 |
| Conread position: | 1-159 |
| Cow position: | chr11:54265003-54265159 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 140, 92 |
| Conread position: | 1-165 |
| Cow position: | chr11:71294800-71294963 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 1-167 |
| Cow position: | chr11:31206253-31206421 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-167 |
| Cow position: | chr11:81336981-81336824 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 46 |
| Conread position: | 1-234 |
| Cow position: | chr11:48930434-48930207 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 176, 91 |
| Conread position: | 1-236 |
| Cow position: | chr11:80003024-80003275 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 2-127 |
| Cow position: | chr11:77193738-77193614 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 2-222 |
| Cow position: | chr11:29014382-29014609 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 141, 119 |
| Conread position: | 2-223 |
| Cow position: | chr11:27666189-27665955 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 98, 134 |
| Conread position: | 6-222 |
| Cow position: | chr11:53270531-53270310 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 135, 83 |
| Conread position: | 10-215 |
| Cow position: | chr11:16653398-16653204 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 132, 58 |
| Conread position: | 26-171 |
| Cow position: | chr11:60008214-60008358 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 99, 42 |
| Conread position: | 29-247 |
| Cow position: | chr11:54668830-54669062 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 32-248 |
| Cow position: | chr11:21922470-21922697 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 103, 72 |
Show alignments to all cow chromosomes.