Cow genome map


           Conread name:
           Ovi1-UMC-pd3ov4-004-c08
        

               Conread position:
               1-129
               

               Cow position:
               chr13:51682160-51682286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr13:22976961-22976733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               140, 52
               

               Conread position:
               1-234
               

               Cow position:
               chr13:16342926-16342689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               102, 28
               

               Conread position:
               2-230
               

               Cow position:
               chr13:6178382-6178618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               139, 116
               

               Conread position:
               3-172
               

               Cow position:
               chr13:46131695-46131528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               139, 64
               

               Conread position:
               5-223
               

               Cow position:
               chr13:4441536-4441297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               62, 95
               

               Conread position:
               5-263
               

               Cow position:
               chr13:30772885-30772614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               11-166
               

               Cow position:
               chr13:24739961-24740113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               131, 15
               

               Conread position:
               14-211
               

               Cow position:
               chr13:25981528-25981330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               130, 74
               
Show alignments to all cow chromosomes.