Cow genome map


           Conread name:
           Ovi1-UMC-pd3ov4-004-c08
        

               Conread position:
               1-126
               

               Cow position:
               chr14:25393830-25393704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr14:25952538-25952757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               140, 36
               

               Conread position:
               1-233
               

               Cow position:
               chr14:19542358-19542596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               163, 15
               

               Conread position:
               4-223
               

               Cow position:
               chr14:35434828-35435045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 22
               

               Conread position:
               31-223
               

               Cow position:
               chr14:7600176-7600373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 24
               

               Conread position:
               32-222
               

               Cow position:
               chr14:25346461-25346270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               110, 78
               

               Conread position:
               39-246
               

               Cow position:
               chr14:43693798-43694015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               104, 89
               
Show alignments to all cow chromosomes.