Cow genome map


           Conread name:
           Ovi1-UMC-pd3ov4-004-c08
        

               Conread position:
               1-171
               

               Cow position:
               chr21:12560363-12560194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               140, 128
               

               Conread position:
               1-219
               

               Cow position:
               chr21:665052-664842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr21:3649115-3648898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               119, 26
               

               Conread position:
               1-223
               

               Cow position:
               chr21:20575393-20575170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               140, 81
               

               Conread position:
               1-223
               

               Cow position:
               chr21:37341782-37341554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               141, 194
               

               Conread position:
               1-240
               

               Cow position:
               chr21:30192093-30191853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               130, 65
               

               Conread position:
               3-233
               

               Cow position:
               chr21:13160139-13160378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               138, 115
               

               Conread position:
               11-223
               

               Cow position:
               chr21:7646536-7646317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               115, 74
               

               Conread position:
               11-245
               

               Cow position:
               chr21:22944824-22945066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               132, 117
               

               Conread position:
               59-219
               

               Cow position:
               chr21:30644839-30644675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 82
               
Show alignments to all cow chromosomes.