Cow genome map


           Conread name:
           Ovi1-UMC-pd3ov4-004-c08
        

               Conread position:
               1-134
               

               Cow position:
               chr24:37894969-37894841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               129, 55
               

               Conread position:
               1-162
               

               Cow position:
               chr24:23820358-23820200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               139, 69
               

               Conread position:
               1-166
               

               Cow position:
               chr24:7030157-7029995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               120, 136
               

               Conread position:
               1-223
               

               Cow position:
               chr24:29070195-29069970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               142, 95
               

               Conread position:
               1-228
               

               Cow position:
               chr24:5376095-5375865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               165, 138
               

               Conread position:
               1-235
               

               Cow position:
               chr24:41242001-41242233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               136, 155
               

               Conread position:
               3-236
               

               Cow position:
               chr24:19784747-19784987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               108, 28
               

               Conread position:
               6-223
               

               Cow position:
               chr24:16162801-16163024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               11-223
               

               Cow position:
               chr24:31393810-31393590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               132, 47
               

               Conread position:
               34-221
               

               Cow position:
               chr24:10460376-10460573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 98
               

               Conread position:
               53-234
               

               Cow position:
               chr24:30191677-30191867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               90, 81
               
Show alignments to all cow chromosomes.