Cow genome map


           Conread name:
           Ovi1-UMC-pd3ov4-004-c08
        

               Conread position:
               1-140
               

               Cow position:
               chr28:23155924-23156061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr28:11783711-11783555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               113, 142
               

               Conread position:
               1-229
               

               Cow position:
               chr28:7595367-7595130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               140, 70
               

               Conread position:
               1-240
               

               Cow position:
               chr28:28780046-28780280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               140, 133
               

               Conread position:
               2-162
               

               Cow position:
               chr28:24330454-24330297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               3-235
               

               Cow position:
               chr28:16965862-16966115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               107, 161
               

               Conread position:
               11-223
               

               Cow position:
               chr28:6871280-6871495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               132, 102
               

               Conread position:
               11-223
               

               Cow position:
               chr28:22202154-22202374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               158, 93
               

               Conread position:
               48-223
               

               Cow position:
               chr28:6508262-6508449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               81, 0
               
Show alignments to all cow chromosomes.