Cow genome map
| Conread name: | Ovi1-UMC-pd3ov4-004-c08 |
| Conread position: | 1-148 |
| Cow position: | chr3:4555679-4555533 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 1-160 |
| Cow position: | chr3:46134906-46134750 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 87, 127 |
| Conread position: | 1-206 |
| Cow position: | chr3:16622039-16621833 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 135, 154 |
| Conread position: | 1-213 |
| Cow position: | chr3:58429301-58429082 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 116, 144 |
| Conread position: | 1-215 |
| Cow position: | chr3:54570610-54570825 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 141, 82 |
| Conread position: | 1-223 |
| Cow position: | chr3:15329442-15329213 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 141, 15 |
| Conread position: | 1-223 |
| Cow position: | chr3:16170040-16169812 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 123, 65 |
| Conread position: | 1-223 |
| Cow position: | chr3:24646170-24646401 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 34, 117 |
| Conread position: | 1-223 |
| Cow position: | chr3:35144786-35145009 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 143, 93 |
| Conread position: | 1-223 |
| Cow position: | chr3:73827053-73827282 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 167, 134 |
| Conread position: | 1-224 |
| Cow position: | chr3:63199483-63199704 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 141, 26 |
| Conread position: | 1-235 |
| Cow position: | chr3:67927194-67927441 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 109, 117 |
| Conread position: | 1-248 |
| Cow position: | chr3:64435847-64435586 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 141, 130 |
| Conread position: | 2-148 |
| Cow position: | chr3:75254456-75254306 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 62 |
| Conread position: | 2-219 |
| Cow position: | chr3:31924626-31924409 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 91, 97 |
| Conread position: | 2-223 |
| Cow position: | chr3:13478506-13478727 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 143, 34 |
| Conread position: | 2-233 |
| Cow position: | chr3:22850712-22850472 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 129, 57 |
| Conread position: | 3-223 |
| Cow position: | chr3:37808119-37807898 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 139, 128 |
| Conread position: | 3-223 |
| Cow position: | chr3:75163233-75163010 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 37, 140 |
| Conread position: | 8-223 |
| Cow position: | chr3:54554427-54554640 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 134, 158 |
| Conread position: | 23-234 |
| Cow position: | chr3:76928271-76928478 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 117, 95 |
| Conread position: | 30-246 |
| Cow position: | chr3:54051562-54051337 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 39-223 |
| Cow position: | chr3:17681509-17681688 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 110, 89 |
Show alignments to all cow chromosomes.