Cow genome map
| Conread name: | Ovi1-UMC-pd3ov4-004-c08 |
| Conread position: | 1-215 |
| Cow position: | chr5:63818109-63817887 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 148, 127 |
| Conread position: | 1-219 |
| Cow position: | chr5:7659612-7659391 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 129 |
| Conread position: | 1-219 |
| Cow position: | chr5:57733613-57733826 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 29, 156 |
| Conread position: | 1-223 |
| Cow position: | chr5:11955468-11955241 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 10, 138 |
| Conread position: | 1-223 |
| Cow position: | chr5:38970724-38970947 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 114, 93 |
| Conread position: | 1-223 |
| Cow position: | chr5:55985485-55985255 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 1-223 |
| Cow position: | chr5:70768585-70768815 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 129, 39 |
| Conread position: | 1-236 |
| Cow position: | chr5:18582839-18583081 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 140, 116 |
| Conread position: | 1-247 |
| Cow position: | chr5:44491643-44491906 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 121 |
| Conread position: | 2-126 |
| Cow position: | chr5:35708340-35708215 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 7-247 |
| Cow position: | chr5:65053687-65053933 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 111, 7 |
| Conread position: | 9-219 |
| Cow position: | chr5:4989628-4989846 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 137, 124 |
| Conread position: | 9-223 |
| Cow position: | chr5:18883045-18882835 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 133, 50 |
| Conread position: | 31-286 |
| Cow position: | chr5:51761128-51760872 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 111, 62 |
| Conread position: | 39-248 |
| Cow position: | chr5:7780468-7780678 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 103, 33 |
| Conread position: | 48-223 |
| Cow position: | chr5:57147687-57147875 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 55-246 |
| Cow position: | chr5:42787019-42786811 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 75-235 |
| Cow position: | chr5:51994010-51994181 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.