Cow genome map
| Conread name: | Pig1-30L12 |
| Conread position: | 17-242 |
| Cow position: | chr9:4943276-4943500 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 145, 16 |
| Conread position: | 17-271 |
| Cow position: | chr9:32969487-32969234 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 145, 17 |
| Conread position: | 17-333 |
| Cow position: | chr9:5514959-5514654 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 140, 15 |
| Conread position: | 17-334 |
| Cow position: | chr9:9646702-9646397 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 152, 16 |
| Conread position: | 17-334 |
| Cow position: | chr9:16176308-16175994 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 145, 17 |
| Conread position: | 17-334 |
| Cow position: | chr9:28688640-28688327 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 134, 16 |
| Conread position: | 17-334 |
| Cow position: | chr9:31064969-31064653 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 145, 16 |
| Conread position: | 17-335 |
| Cow position: | chr9:1251461-1251775 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 145, 16 |
| Conread position: | 17-335 |
| Cow position: | chr9:28678510-28678192 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 83 |
| Conread position: | 17-335 |
| Cow position: | chr9:51211218-51210901 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 16 |
| Conread position: | 17-335 |
| Cow position: | chr9:59426306-59425994 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 145, 16 |
| Conread position: | 17-337 |
| Cow position: | chr9:22654109-22653790 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 17-337 |
| Cow position: | chr9:37970659-37970987 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 74, 17 |
| Conread position: | 17-337 |
| Cow position: | chr9:42569439-42569124 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 165, 17 |
| Conread position: | 17-337 |
| Cow position: | chr9:47002732-47002413 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 145, 17 |
| Conread position: | 17-337 |
| Cow position: | chr9:59173609-59173936 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 17-337 |
| Cow position: | chr9:60277479-60277798 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 17 |
| Conread position: | 19-331 |
| Cow position: | chr9:1980525-1980215 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 137, 14 |
| Conread position: | 26-313 |
| Cow position: | chr9:2053283-2053009 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 120, 7 |
| Conread position: | 26-335 |
| Cow position: | chr9:17063860-17064168 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 136, 7 |
| Conread position: | 28-335 |
| Cow position: | chr9:64017935-64018242 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 72 |
| Conread position: | 33-334 |
| Cow position: | chr9:53702207-53702498 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 150, 66 |
| Conread position: | 33-335 |
| Cow position: | chr9:36725023-36724721 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 67 |
| Conread position: | 33-349 |
| Cow position: | chr9:7016416-7016105 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 83, 48 |
| Conread position: | 34-337 |
| Cow position: | chr9:4533017-4532715 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 128, 34 |
| Conread position: | 34-337 |
| Cow position: | chr9:51181664-51181966 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 70 |
| Conread position: | 34-343 |
| Cow position: | chr9:9329577-9329883 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 48 |
| Conread position: | 34-346 |
| Cow position: | chr9:27035203-27034894 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 128, 70 |
| Conread position: | 36-311 |
| Cow position: | chr9:51757382-51757659 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 45, 58 |
| Conread position: | 37-251 |
| Cow position: | chr9:14761932-14762141 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 125, 39 |
| Conread position: | 37-328 |
| Cow position: | chr9:44818694-44818416 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 91, 39 |
| Conread position: | 37-345 |
| Cow position: | chr9:45873863-45873554 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 125, 70 |
| Conread position: | 37-350 |
| Cow position: | chr9:3005727-3006040 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 145, 70 |
| Conread position: | 39-194 |
| Cow position: | chr9:25633491-25633647 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 102, 61 |
| Conread position: | 43-351 |
| Cow position: | chr9:4650598-4650903 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 47-335 |
| Cow position: | chr9:1075690-1075978 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 115, 60 |
| Conread position: | 97-337 |
| Cow position: | chr9:7003249-7003006 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 100-335 |
| Cow position: | chr9:49177371-49177608 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 110-333 |
| Cow position: | chr9:7061642-7061867 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 117-338 |
| Cow position: | chr9:25022858-25023081 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 130-335 |
| Cow position: | chr9:25754798-25755004 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 135-335 |
| Cow position: | chr9:16268793-16268591 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 161-335 |
| Cow position: | chr9:60651318-60651493 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 161-345 |
| Cow position: | chr9:25484265-25484078 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 184-335 |
| Cow position: | chr9:163133-163284 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.