Cow genome map

Conread name: Pig1-30L12

Conread position: 16-337
Cow position: chrX:23040679-23040997 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 146, 18

Conread position: 16-337
Cow position: chrX:29096651-29096331 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 18

Conread position: 17-243
Cow position: chrX:27624438-27624213 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 145, 16

Conread position: 17-252
Cow position: chrX:41411626-41411393 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 145, 16

Conread position: 17-263
Cow position: chrX:983104-982859 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 145, 16

Conread position: 17-313
Cow position: chrX:6282311-6282598 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 165, 15

Conread position: 17-313
Cow position: chrX:21223368-21223076 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 17

Conread position: 17-315
Cow position: chrX:506889-507186 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 145, 16

Conread position: 17-316
Cow position: chrX:30712031-30711734 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 145, 17

Conread position: 17-333
Cow position: chrX:5323283-5323596 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 34, 16

Conread position: 17-333
Cow position: chrX:21579910-21579603 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 211
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 17-333
Cow position: chrX:40246437-40246747 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 210
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 16

Conread position: 17-334
Cow position: chrX:971217-970901 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 17-334
Cow position: chrX:3375670-3375986 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 145, 16

Conread position: 17-334
Cow position: chrX:20720432-20720116 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 17

Conread position: 17-334
Cow position: chrX:21829973-21829657 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 145, 17

Conread position: 17-335
Cow position: chrX:2604490-2604173 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 16

Conread position: 17-335
Cow position: chrX:5336044-5336361 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 145, 16

Conread position: 17-335
Cow position: chrX:6872631-6872948 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 137, 16

Conread position: 17-335
Cow position: chrX:10531116-10531433 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 152, 16

Conread position: 17-335
Cow position: chrX:13076255-13076572 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 15

Conread position: 17-335
Cow position: chrX:14595213-14594896 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 15

Conread position: 17-335
Cow position: chrX:15178983-15179307 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 145, 16

Conread position: 17-335
Cow position: chrX:20315620-20315930 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 145, 16

Conread position: 17-335
Cow position: chrX:21340842-21340529 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 116, 16

Conread position: 17-335
Cow position: chrX:27425878-27426195 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 16

Conread position: 17-335
Cow position: chrX:28585422-28585105 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 145, 16

Conread position: 17-335
Cow position: chrX:29910983-29911300 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 156, 16

Conread position: 17-335
Cow position: chrX:30055293-30055610 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 145, 16

Conread position: 17-335
Cow position: chrX:35530304-35529987 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 16

Conread position: 17-337
Cow position: chrX:320912-320593 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 145, 17

Conread position: 17-337
Cow position: chrX:1547422-1547104 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 145, 17

Conread position: 17-337
Cow position: chrX:7094040-7093721 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 16

Conread position: 17-337
Cow position: chrX:16362682-16363001 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 16

Conread position: 17-337
Cow position: chrX:16699749-16699430 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 17

Conread position: 17-337
Cow position: chrX:23277465-23277149 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 172, 17

Conread position: 17-337
Cow position: chrX:23391151-23391469 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 17

Conread position: 17-337
Cow position: chrX:26758161-26758477 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 146, 17

Conread position: 17-337
Cow position: chrX:30011481-30011162 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 16

Conread position: 17-337
Cow position: chrX:31198889-31198570 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 145, 16

Conread position: 17-341
Cow position: chrX:12287961-12288277 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 166, 16

Conread position: 17-341
Cow position: chrX:21304083-21304407 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 16

Conread position: 17-342
Cow position: chrX:37849455-37849133 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 162, 16

Conread position: 17-350
Cow position: chrX:39563491-39563821 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 145, 16

Conread position: 26-302
Cow position: chrX:1834251-1833976 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 132, 7

Conread position: 26-335
Cow position: chrX:7752332-7752025 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 132, 7

Conread position: 26-335
Cow position: chrX:12353673-12353365 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 7

Conread position: 26-335
Cow position: chrX:18219830-18219522 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 7

Conread position: 26-335
Cow position: chrX:37812595-37812286 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 136, 7

Conread position: 29-334
Cow position: chrX:3407386-3407688 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 124, 30

Conread position: 29-334
Cow position: chrX:10416860-10417171 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 122, 59

Conread position: 29-337
Cow position: chrX:13416995-13417298 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 117, 16

Conread position: 33-314
Cow position: chrX:23213926-23214207 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 130, 67

Conread position: 33-334
Cow position: chrX:18534897-18534606 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 123, 53

Conread position: 33-335
Cow position: chrX:5394574-5394876 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 199
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 152, 71

Conread position: 33-335
Cow position: chrX:8480077-8479774 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 129, 55

Conread position: 33-335
Cow position: chrX:20359624-20359926 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 129, 55

Conread position: 33-335
Cow position: chrX:26998504-26998209 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 152, 9

Conread position: 33-335
Cow position: chrX:31493845-31493545 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 136, 28

Conread position: 34-335
Cow position: chrX:18659359-18659657 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 54, 44

Conread position: 34-350
Cow position: chrX:28758207-28758531 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 94, 70

Conread position: 35-243
Cow position: chrX:34345663-34345455 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 52

Conread position: 37-335
Cow position: chrX:12279847-12280145 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 125, 63

Conread position: 37-335
Cow position: chrX:22611369-22611072 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 125, 63

Conread position: 37-335
Cow position: chrX:32066739-32067031 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 125, 70

Conread position: 43-349
Cow position: chrX:29885410-29885099 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 45

Conread position: 44-294
Cow position: chrX:34553544-34553296 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 190

Conread position: 55-290
Cow position: chrX:28870773-28871007 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 48

Conread position: 55-334
Cow position: chrX:21490601-21490323 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 103, 36

Conread position: 80-335
Cow position: chrX:15980566-15980825 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 105-337
Cow position: chrX:30183530-30183765 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 57, 188

Conread position: 109-334
Cow position: chrX:13084359-13084598 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 112

Conread position: 161-335
Cow position: chrX:17478222-17478397 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 22, 60

Conread position: 168-335
Cow position: chrX:11433994-11433826 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 80

Conread position: 181-335
Cow position: chrX:29947986-29947832 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 181-338
Cow position: chrX:22488467-22488310 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.