Cow genome map

Conread name: Pig1-92A03

Conread position: 296-537
Cow position: chr13:18551105-18550859 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 304-530
Cow position: chr13:35564402-35564173 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 19, 61

Conread position: 313-519
Cow position: chr13:20834765-20834972 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 25

Conread position: 313-537
Cow position: chr13:22075767-22075525 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 314-489
Cow position: chr13:54695824-54696011 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 16

Conread position: 314-531
Cow position: chr13:16327749-16327531 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 50, 18

Conread position: 314-532
Cow position: chr13:46501394-46501181 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 314-535
Cow position: chr13:9125760-9125527 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 16

Conread position: 314-537
Cow position: chr13:33282097-33281860 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 16

Conread position: 316-537
Cow position: chr13:12745752-12745526 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 71

Conread position: 318-537
Cow position: chr13:3016086-3016319 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 319-529
Cow position: chr13:22886908-22887127 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 53, 11

Conread position: 323-537
Cow position: chr13:26508546-26508338 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 60, 0

Conread position: 324-532
Cow position: chr13:43166958-43167172 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 14

Conread position: 324-535
Cow position: chr13:12521701-12521922 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 8, 28

Conread position: 324-537
Cow position: chr13:32717790-32718009 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 176

Conread position: 325-523
Cow position: chr13:33975498-33975299 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 62, 18

Conread position: 326-537
Cow position: chr13:32167233-32167456 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 60, 12

Conread position: 327-530
Cow position: chr13:54864950-54865145 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 87

Conread position: 327-535
Cow position: chr13:17346887-17346666 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 327-537
Cow position: chr13:16952530-16952325 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 70, 56

Conread position: 328-532
Cow position: chr13:26522868-26523078 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 330-537
Cow position: chr13:33954953-33955171 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 58, 8

Conread position: 332-532
Cow position: chr13:43155787-43155996 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 333-478
Cow position: chr13:38691469-38691617 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 127

Conread position: 333-529
Cow position: chr13:50739240-50739031 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 333-532
Cow position: chr13:24280320-24280116 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 25

Conread position: 333-532
Cow position: chr13:40464292-40464089 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 342-537
Cow position: chr13:32657431-32657231 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 5

Conread position: 361-530
Cow position: chr13:32904814-32904640 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 380-537
Cow position: chr13:54094826-54094664 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 381-532
Cow position: chr13:52966886-52966737 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 88

Conread position: 381-532
Cow position: chr13:54814898-54815052 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 381-534
Cow position: chr13:56673959-56674114 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 381-537
Cow position: chr13:35719126-35719283 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 383-535
Cow position: chr13:54471022-54470873 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 113

Conread position: 386-532
Cow position: chr13:58620937-58621085 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 107

Conread position: 388-532
Cow position: chr13:11834472-11834620 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 24

Conread position: 388-532
Cow position: chr13:49847931-49847785 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 134

Conread position: 388-535
Cow position: chr13:33347133-33346992 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 69

Conread position: 388-536
Cow position: chr13:21120867-21120722 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 92

Conread position: 388-537
Cow position: chr13:14099107-14099258 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 388-537
Cow position: chr13:14717331-14717484 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 129

Conread position: 388-537
Cow position: chr13:18761726-18761874 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 79

Conread position: 388-537
Cow position: chr13:46284609-46284754 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 51

Conread position: 388-537
Cow position: chr13:54969796-54969951 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 53

Conread position: 389-516
Cow position: chr13:18350839-18350711 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 389-532
Cow position: chr13:7010475-7010332 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 89

Conread position: 389-535
Cow position: chr13:38898239-38898383 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 104

Conread position: 389-537
Cow position: chr13:29820199-29820352 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 390-519
Cow position: chr13:35654089-35654218 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 7, 56

Conread position: 395-535
Cow position: chr13:46430308-46430447 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 119, 0

Conread position: 396-527
Cow position: chr13:54080815-54080950 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 396-536
Cow position: chr13:9803063-9802923 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 396-536
Cow position: chr13:15090911-15091054 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 78

Conread position: 396-537
Cow position: chr13:661645-661782 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 396-537
Cow position: chr13:34761676-34761539 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 397-535
Cow position: chr13:20156480-20156343 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 399-505
Cow position: chr13:6894030-6893924 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 399-536
Cow position: chr13:17796364-17796223 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 105

Conread position: 400-535
Cow position: chr13:58348074-58347942 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 400-537
Cow position: chr13:30271314-30271178 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 116
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 117, 0

Conread position: 402-537
Cow position: chr13:14220483-14220351 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 404-536
Cow position: chr13:55592049-55592179 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 404-536
Cow position: chr13:55618130-55618260 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 408-515
Cow position: chr13:11413351-11413461 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 413-535
Cow position: chr13:17991637-17991515 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 413-536
Cow position: chr13:46353535-46353658 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 413-537
Cow position: chr13:11463374-11463495 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 413-537
Cow position: chr13:22082368-22082244 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 421-537
Cow position: chr13:37435288-37435175 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 428-530
Cow position: chr13:46394530-46394428 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 431-537
Cow position: chr13:40460125-40460019 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 432-532
Cow position: chr13:10658042-10657942 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 432-535
Cow position: chr13:34191755-34191857 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 433-532
Cow position: chr13:25207072-25206973 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 435-535
Cow position: chr13:25058111-25058011 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 440-537
Cow position: chr13:9501636-9501732 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 440-537
Cow position: chr13:11514228-11514131 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 440-537
Cow position: chr13:22783897-22783994 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 440-537
Cow position: chr13:26507886-26507789 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 445-528
Cow position: chr13:53858115-53858198 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 76
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.