Cow genome map
| Conread name: | Pig1-92A03 |
| Conread position: | 296-537 |
| Cow position: | chr15:35967276-35967527 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 34 |
| Conread position: | 299-537 |
| Cow position: | chr15:26933747-26933991 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 59 |
| Conread position: | 312-532 |
| Cow position: | chr15:34255546-34255759 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 312-535 |
| Cow position: | chr15:37918839-37918606 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 312-537 |
| Cow position: | chr15:9178009-9178244 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 312-537 |
| Cow position: | chr15:10568924-10569150 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 83, 18 |
| Conread position: | 314-505 |
| Cow position: | chr15:16585705-16585502 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 314-524 |
| Cow position: | chr15:23957898-23957685 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 314-527 |
| Cow position: | chr15:26734822-26734605 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 70, 16 |
| Conread position: | 314-532 |
| Cow position: | chr15:24411610-24411384 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 74, 16 |
| Conread position: | 323-537 |
| Cow position: | chr15:20482657-20482889 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 324-535 |
| Cow position: | chr15:34037008-34037231 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 324-537 |
| Cow position: | chr15:21836868-21836647 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 62, 14 |
| Conread position: | 330-525 |
| Cow position: | chr15:23139972-23140154 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 66, 39 |
| Conread position: | 330-530 |
| Cow position: | chr15:4277885-4278094 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 8 |
| Conread position: | 332-537 |
| Cow position: | chr15:10698401-10698593 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 333-527 |
| Cow position: | chr15:4373654-4373456 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 180 |
| Conread position: | 333-532 |
| Cow position: | chr15:31545174-31545385 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 333-534 |
| Cow position: | chr15:6749670-6749884 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 64, 31 |
| Conread position: | 333-537 |
| Cow position: | chr15:22886728-22886516 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 114 |
| Conread position: | 333-537 |
| Cow position: | chr15:27247680-27247464 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 334-537 |
| Cow position: | chr15:22854581-22854367 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 52, 168 |
| Conread position: | 335-537 |
| Cow position: | chr15:36658954-36659154 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 336-521 |
| Cow position: | chr15:30934375-30934569 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 340-524 |
| Cow position: | chr15:39363841-39364028 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 380-532 |
| Cow position: | chr15:35283348-35283504 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 380-537 |
| Cow position: | chr15:12163401-12163561 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 35 |
| Conread position: | 380-537 |
| Cow position: | chr15:17788225-17788069 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 380-537 |
| Cow position: | chr15:39200898-39200742 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 380-537 |
| Cow position: | chr15:40498174-40498335 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 380-537 |
| Cow position: | chr15:52981946-52981796 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 381-532 |
| Cow position: | chr15:42195148-42195302 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 112 |
| Conread position: | 381-537 |
| Cow position: | chr15:24864151-24864307 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 16, 73 |
| Conread position: | 383-524 |
| Cow position: | chr15:31182543-31182403 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 383-531 |
| Cow position: | chr15:3572586-3572735 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 383-537 |
| Cow position: | chr15:11957655-11957498 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 383-537 |
| Cow position: | chr15:26421484-26421640 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 384-537 |
| Cow position: | chr15:44879717-44879564 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 111, 130 |
| Conread position: | 385-536 |
| Cow position: | chr15:31599445-31599293 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 385-536 |
| Cow position: | chr15:31907760-31907609 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 12, 89 |
| Conread position: | 387-531 |
| Cow position: | chr15:36839063-36839209 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 388-522 |
| Cow position: | chr15:46005540-46005675 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 388-526 |
| Cow position: | chr15:37964642-37964503 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 388-528 |
| Cow position: | chr15:27749072-27749209 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 388-536 |
| Cow position: | chr15:47821486-47821338 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 17 |
| Conread position: | 388-536 |
| Cow position: | chr15:50561287-50561438 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 388-537 |
| Cow position: | chr15:12036921-12036771 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 388-537 |
| Cow position: | chr15:24977068-24977215 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 389-537 |
| Cow position: | chr15:23109172-23109325 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 396-537 |
| Cow position: | chr15:27863223-27863368 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 396-537 |
| Cow position: | chr15:38322938-38322793 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 399-532 |
| Cow position: | chr15:10303322-10303185 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 399-535 |
| Cow position: | chr15:8022150-8022014 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 399-537 |
| Cow position: | chr15:15215117-15214975 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 402-537 |
| Cow position: | chr15:4216049-4216180 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 403-537 |
| Cow position: | chr15:23547897-23548031 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 416-537 |
| Cow position: | chr15:10189442-10189322 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 419-530 |
| Cow position: | chr15:35663530-35663415 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 419-536 |
| Cow position: | chr15:23224477-23224588 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 419-537 |
| Cow position: | chr15:5527192-5527074 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 430-537 |
| Cow position: | chr15:51583104-51582997 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 434-537 |
| Cow position: | chr15:14323355-14323457 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 435-530 |
| Cow position: | chr15:28177514-28177419 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 449-532 |
| Cow position: | chr15:45641174-45641257 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 74 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.