Cow genome map
| Conread name: | Pig1-92A03 |
| Conread position: | 292-524 |
| Cow position: | chr17:9778578-9778802 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 38 |
| Conread position: | 312-537 |
| Cow position: | chr17:20216098-20216338 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 313-537 |
| Cow position: | chr17:11171726-11171958 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 314-484 |
| Cow position: | chr17:18824725-18824905 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 314-524 |
| Cow position: | chr17:25740887-25741104 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 314-537 |
| Cow position: | chr17:21730354-21730125 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 16 |
| Conread position: | 314-537 |
| Cow position: | chr17:27257297-27257047 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 74, 16 |
| Conread position: | 315-524 |
| Cow position: | chr17:35991032-35991240 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 316-537 |
| Cow position: | chr17:2270945-2271170 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 321-524 |
| Cow position: | chr17:19881069-19881267 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 321-525 |
| Cow position: | chr17:10790256-10790456 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 322-523 |
| Cow position: | chr17:26084977-26085179 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 70, 20 |
| Conread position: | 325-537 |
| Cow position: | chr17:10271439-10271662 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 63, 137 |
| Conread position: | 327-526 |
| Cow position: | chr17:9060189-9059989 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 47, 19 |
| Conread position: | 327-536 |
| Cow position: | chr17:39012671-39012888 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 59, 184 |
| Conread position: | 330-537 |
| Cow position: | chr17:7595116-7595321 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 330-537 |
| Cow position: | chr17:15634921-15634714 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 67, 8 |
| Conread position: | 330-537 |
| Cow position: | chr17:32457619-32457398 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 51, 8 |
| Conread position: | 333-524 |
| Cow position: | chr17:24339135-24339326 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 333-529 |
| Cow position: | chr17:27819254-27819459 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 333-532 |
| Cow position: | chr17:5380922-5381117 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 141, 66 |
| Conread position: | 333-532 |
| Cow position: | chr17:37138715-37138924 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 335-535 |
| Cow position: | chr17:35107162-35107365 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 335-537 |
| Cow position: | chr17:30236164-30236364 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 62, 10 |
| Conread position: | 336-522 |
| Cow position: | chr17:8890258-8890446 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 112 |
| Conread position: | 337-530 |
| Cow position: | chr17:3620115-3619923 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 101, 41 |
| Conread position: | 338-535 |
| Cow position: | chr17:8832163-8831974 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 71, 17 |
| Conread position: | 340-515 |
| Cow position: | chr17:11837381-11837552 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 350-537 |
| Cow position: | chr17:27505076-27505267 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 362-520 |
| Cow position: | chr17:40854846-40855006 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 380-529 |
| Cow position: | chr17:34864585-34864731 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 380-536 |
| Cow position: | chr17:37414884-37414730 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 381-531 |
| Cow position: | chr17:25707970-25708121 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 383-531 |
| Cow position: | chr17:33903906-33903758 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 14, 84 |
| Conread position: | 383-536 |
| Cow position: | chr17:13716021-13715864 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 383-536 |
| Cow position: | chr17:25181130-25180980 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 383-537 |
| Cow position: | chr17:9748760-9748915 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 383-537 |
| Cow position: | chr17:35212382-35212527 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 384-536 |
| Cow position: | chr17:18568920-18568767 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 87 |
| Conread position: | 388-532 |
| Cow position: | chr17:6570119-6569979 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 9, 108 |
| Conread position: | 388-537 |
| Cow position: | chr17:4085776-4085926 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 115, 131 |
| Conread position: | 388-537 |
| Cow position: | chr17:23318299-23318150 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 9, 125 |
| Conread position: | 389-531 |
| Cow position: | chr17:5787815-5787673 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 129 |
| Conread position: | 389-537 |
| Cow position: | chr17:144156-144009 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 389-537 |
| Cow position: | chr17:1455918-1455771 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 389-537 |
| Cow position: | chr17:26614710-26614562 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 9, 99 |
| Conread position: | 393-505 |
| Cow position: | chr17:33153987-33154099 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 393-537 |
| Cow position: | chr17:13229402-13229547 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 396-535 |
| Cow position: | chr17:15922868-15923006 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 396-537 |
| Cow position: | chr17:38139535-38139680 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 397-532 |
| Cow position: | chr17:24880771-24880906 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 397-532 |
| Cow position: | chr17:34627818-34627684 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 397-537 |
| Cow position: | chr17:18173790-18173660 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 403-537 |
| Cow position: | chr17:8861112-8860985 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 417-537 |
| Cow position: | chr17:23879475-23879355 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 419-537 |
| Cow position: | chr17:37043362-37043247 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 423-535 |
| Cow position: | chr17:11826400-11826288 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 425-537 |
| Cow position: | chr17:27781125-27781237 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-537 |
| Cow position: | chr17:8093916-8094017 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
Show alignments to all cow chromosomes.