Cow genome map
| Conread name: | Pig1-92A03 |
| Conread position: | 311-537 |
| Cow position: | chr2:42925188-42925422 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 8 |
| Conread position: | 312-532 |
| Cow position: | chr2:70306051-70306269 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 130, 18 |
| Conread position: | 313-536 |
| Cow position: | chr2:7721019-7720783 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 114 |
| Conread position: | 313-537 |
| Cow position: | chr2:83745143-83744923 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 71, 197 |
| Conread position: | 314-495 |
| Cow position: | chr2:15769600-15769417 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 314-504 |
| Cow position: | chr2:70601904-70602098 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 16 |
| Conread position: | 314-521 |
| Cow position: | chr2:29288930-29289138 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 77, 16 |
| Conread position: | 314-524 |
| Cow position: | chr2:50606440-50606656 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 16 |
| Conread position: | 314-528 |
| Cow position: | chr2:56269722-56269492 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 314-535 |
| Cow position: | chr2:29382786-29382549 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 16 |
| Conread position: | 314-537 |
| Cow position: | chr2:67485138-67485377 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 315-532 |
| Cow position: | chr2:4010016-4010227 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 23 |
| Conread position: | 318-530 |
| Cow position: | chr2:45726087-45726306 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 12 |
| Conread position: | 319-530 |
| Cow position: | chr2:14099545-14099773 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 321-530 |
| Cow position: | chr2:1651303-1651523 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 161 |
| Conread position: | 330-514 |
| Cow position: | chr2:54306584-54306768 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 330-522 |
| Cow position: | chr2:69046947-69047135 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 62, 8 |
| Conread position: | 330-524 |
| Cow position: | chr2:40791085-40791286 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 330-524 |
| Cow position: | chr2:56042448-56042246 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 8 |
| Conread position: | 330-524 |
| Cow position: | chr2:70790840-70790635 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 56, 8 |
| Conread position: | 330-537 |
| Cow position: | chr2:24106302-24106528 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 56, 8 |
| Conread position: | 330-537 |
| Cow position: | chr2:27613112-27612900 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 330-537 |
| Cow position: | chr2:42309645-42309424 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 332-532 |
| Cow position: | chr2:31113758-31113965 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 179 |
| Conread position: | 333-529 |
| Cow position: | chr2:425726-425937 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 207 |
| Conread position: | 333-534 |
| Cow position: | chr2:41057601-41057394 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 333-535 |
| Cow position: | chr2:62309516-62309303 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 91 |
| Conread position: | 333-537 |
| Cow position: | chr2:67759216-67759022 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 100, 28 |
| Conread position: | 335-532 |
| Cow position: | chr2:21183078-21183271 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 340-537 |
| Cow position: | chr2:50400343-50400546 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 64 |
| Conread position: | 342-522 |
| Cow position: | chr2:68010594-68010773 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 345-532 |
| Cow position: | chr2:77982212-77982021 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 349-531 |
| Cow position: | chr2:61471776-61471953 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 380-532 |
| Cow position: | chr2:38376875-38377027 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 148 |
| Conread position: | 380-532 |
| Cow position: | chr2:39912624-39912477 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 380-532 |
| Cow position: | chr2:68273551-68273704 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 380-534 |
| Cow position: | chr2:2937537-2937688 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 380-536 |
| Cow position: | chr2:7498548-7498705 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 380-537 |
| Cow position: | chr2:793615-793777 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 107 |
| Conread position: | 380-537 |
| Cow position: | chr2:13466007-13466164 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 381-537 |
| Cow position: | chr2:73027413-73027573 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 382-505 |
| Cow position: | chr2:73794292-73794169 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 100 |
| Conread position: | 383-498 |
| Cow position: | chr2:33259276-33259393 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 383-518 |
| Cow position: | chr2:66779886-66779751 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 383-519 |
| Cow position: | chr2:70752772-70752909 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 383-519 |
| Cow position: | chr2:73999697-73999838 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 383-532 |
| Cow position: | chr2:70464409-70464558 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 383-537 |
| Cow position: | chr2:14749566-14749723 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 92 |
| Conread position: | 383-537 |
| Cow position: | chr2:31155684-31155840 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 383-537 |
| Cow position: | chr2:41765464-41765618 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 30 |
| Conread position: | 383-537 |
| Cow position: | chr2:64197019-64196863 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 387-532 |
| Cow position: | chr2:82054866-82054719 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 94 |
| Conread position: | 387-534 |
| Cow position: | chr2:8601702-8601556 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 387-537 |
| Cow position: | chr2:32453554-32453400 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 108 |
| Conread position: | 388-530 |
| Cow position: | chr2:21955115-21955258 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 388-537 |
| Cow position: | chr2:15162723-15162875 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 106 |
| Conread position: | 388-537 |
| Cow position: | chr2:33659725-33659570 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 388-537 |
| Cow position: | chr2:39832370-39832518 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 127 |
| Conread position: | 389-536 |
| Cow position: | chr2:49480611-49480464 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 389-537 |
| Cow position: | chr2:34256317-34256172 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 88 |
| Conread position: | 389-537 |
| Cow position: | chr2:40313348-40313496 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 390-524 |
| Cow position: | chr2:39499791-39499924 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 390-537 |
| Cow position: | chr2:72583904-72584052 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 391-537 |
| Cow position: | chr2:42774262-42774406 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 392-525 |
| Cow position: | chr2:37091671-37091804 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 12 |
| Conread position: | 392-537 |
| Cow position: | chr2:58685367-58685513 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 396-527 |
| Cow position: | chr2:25084673-25084809 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 396-534 |
| Cow position: | chr2:74209343-74209211 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 396-537 |
| Cow position: | chr2:6444017-6444158 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 397-536 |
| Cow position: | chr2:36294815-36294955 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 109, 91 |
| Conread position: | 397-537 |
| Cow position: | chr2:53000501-53000639 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 398-537 |
| Cow position: | chr2:61442588-61442727 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 402-537 |
| Cow position: | chr2:17427163-17427302 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 402-537 |
| Cow position: | chr2:33596665-33596526 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 413-535 |
| Cow position: | chr2:18600656-18600534 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 419-537 |
| Cow position: | chr2:38913683-38913802 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 25, 9 |
| Conread position: | 419-537 |
| Cow position: | chr2:45435111-45435228 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 428-537 |
| Cow position: | chr2:10641562-10641671 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 440-537 |
| Cow position: | chr2:29545708-29545611 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.