Cow genome map
| Conread name: | Pig1-92A03 |
| Conread position: | 309-537 |
| Cow position: | chr21:31004716-31004481 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 312-526 |
| Cow position: | chr21:23397893-23397663 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 18 |
| Conread position: | 312-531 |
| Cow position: | chr21:34565257-34565026 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 312-537 |
| Cow position: | chr21:12087545-12087790 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 76, 26 |
| Conread position: | 314-535 |
| Cow position: | chr21:35997131-35997364 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 16 |
| Conread position: | 314-537 |
| Cow position: | chr21:4276635-4276409 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 315-524 |
| Cow position: | chr21:36819255-36819046 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 323-524 |
| Cow position: | chr21:23478753-23478550 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 58, 95 |
| Conread position: | 323-534 |
| Cow position: | chr21:13256537-13256322 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 86 |
| Conread position: | 323-535 |
| Cow position: | chr21:15239247-15239471 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 327-532 |
| Cow position: | chr21:36371454-36371672 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 59, 204 |
| Conread position: | 328-531 |
| Cow position: | chr21:26753465-26753680 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 332-535 |
| Cow position: | chr21:31200148-31200351 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 186 |
| Conread position: | 333-537 |
| Cow position: | chr21:6058667-6058453 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 162 |
| Conread position: | 333-537 |
| Cow position: | chr21:37848212-37848418 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 155, 64 |
| Conread position: | 333-537 |
| Cow position: | chr21:47715569-47715351 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 172 |
| Conread position: | 334-512 |
| Cow position: | chr21:45923670-45923486 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 334-519 |
| Cow position: | chr21:42053291-42053103 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 115 |
| Conread position: | 340-530 |
| Cow position: | chr21:23801147-23800941 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 191 |
| Conread position: | 351-524 |
| Cow position: | chr21:24759051-24759226 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 33, 97 |
| Conread position: | 381-537 |
| Cow position: | chr21:8184318-8184483 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 381-537 |
| Cow position: | chr21:11676016-11675859 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 381-537 |
| Cow position: | chr21:18941800-18941640 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 16, 5 |
| Conread position: | 381-537 |
| Cow position: | chr21:48291019-48290864 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 382-537 |
| Cow position: | chr21:31662038-31662198 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 383-537 |
| Cow position: | chr21:4723518-4723675 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 387-537 |
| Cow position: | chr21:9353487-9353642 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 388-531 |
| Cow position: | chr21:24698521-24698669 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 388-535 |
| Cow position: | chr21:6316258-6316405 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 10, 125 |
| Conread position: | 388-537 |
| Cow position: | chr21:13418190-13418040 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 388-537 |
| Cow position: | chr21:31576537-31576686 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 388-537 |
| Cow position: | chr21:37718402-37718255 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 393-537 |
| Cow position: | chr21:27480495-27480639 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 105, 49 |
| Conread position: | 396-537 |
| Cow position: | chr21:4098922-4099064 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 396-537 |
| Cow position: | chr21:33947200-33947059 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 398-537 |
| Cow position: | chr21:18782291-18782425 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 399-537 |
| Cow position: | chr21:49654122-49654262 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 126 |
| Conread position: | 413-537 |
| Cow position: | chr21:17807067-17806943 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 416-530 |
| Cow position: | chr21:9588299-9588411 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 420-537 |
| Cow position: | chr21:37121133-37121018 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 423-534 |
| Cow position: | chr21:47823189-47823077 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 425-536 |
| Cow position: | chr21:8282350-8282456 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 435-537 |
| Cow position: | chr21:30150149-30150049 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 440-532 |
| Cow position: | chr21:23974178-23974087 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.