Cow genome map
| Conread name: | Pig1-92A03 |
| Conread position: | 311-537 |
| Cow position: | chr22:26941681-26941917 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 313-532 |
| Cow position: | chr22:4753855-4753634 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 314-493 |
| Cow position: | chr22:33918010-33917833 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 314-534 |
| Cow position: | chr22:7301943-7301715 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 16 |
| Conread position: | 314-537 |
| Cow position: | chr22:33386617-33386382 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 74, 16 |
| Conread position: | 314-537 |
| Cow position: | chr22:45291223-45291448 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 316-524 |
| Cow position: | chr22:4161721-4161506 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 71, 137 |
| Conread position: | 319-519 |
| Cow position: | chr22:42933586-42933382 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 321-524 |
| Cow position: | chr22:39601305-39601515 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 93 |
| Conread position: | 321-537 |
| Cow position: | chr22:15398681-15398450 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 60, 164 |
| Conread position: | 327-535 |
| Cow position: | chr22:23861249-23861030 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 330-521 |
| Cow position: | chr22:10683755-10683567 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 8 |
| Conread position: | 330-537 |
| Cow position: | chr22:9466515-9466738 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 330-537 |
| Cow position: | chr22:13057791-13057579 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 8 |
| Conread position: | 333-532 |
| Cow position: | chr22:25476968-25477169 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 108, 23 |
| Conread position: | 333-535 |
| Cow position: | chr22:13235446-13235645 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 132, 63 |
| Conread position: | 333-537 |
| Cow position: | chr22:4651088-4651305 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 333-537 |
| Cow position: | chr22:41389022-41389234 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 23, 86 |
| Conread position: | 334-535 |
| Cow position: | chr22:19040458-19040241 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 120 |
| Conread position: | 335-524 |
| Cow position: | chr22:7979612-7979807 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 380-535 |
| Cow position: | chr22:18486957-18486804 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 380-537 |
| Cow position: | chr22:15358211-15358373 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 381-533 |
| Cow position: | chr22:44924091-44923934 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 138 |
| Conread position: | 383-537 |
| Cow position: | chr22:13187850-13188010 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 383-537 |
| Cow position: | chr22:14118949-14119104 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 383-537 |
| Cow position: | chr22:22997447-22997604 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 385-535 |
| Cow position: | chr22:13274455-13274606 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 386-532 |
| Cow position: | chr22:15424107-15424261 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 386-532 |
| Cow position: | chr22:26057352-26057502 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 387-535 |
| Cow position: | chr22:42946076-42945923 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 8, 148 |
| Conread position: | 388-503 |
| Cow position: | chr22:26376244-26376359 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 388-528 |
| Cow position: | chr22:32221616-32221756 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 9, 71 |
| Conread position: | 388-532 |
| Cow position: | chr22:34675497-34675642 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 388-537 |
| Cow position: | chr22:10649803-10649653 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 388-537 |
| Cow position: | chr22:31192599-31192450 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 77 |
| Conread position: | 388-537 |
| Cow position: | chr22:43262432-43262581 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 389-536 |
| Cow position: | chr22:29868631-29868483 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 390-537 |
| Cow position: | chr22:39983221-39983069 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 396-524 |
| Cow position: | chr22:27669477-27669354 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 396-531 |
| Cow position: | chr22:21650153-21650290 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 396-537 |
| Cow position: | chr22:17780743-17780603 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 397-537 |
| Cow position: | chr22:2913263-2913404 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 401-536 |
| Cow position: | chr22:22999581-22999718 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 93 |
| Conread position: | 403-529 |
| Cow position: | chr22:23037757-23037632 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 413-537 |
| Cow position: | chr22:6859230-6859109 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 413-537 |
| Cow position: | chr22:32690435-32690313 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 419-531 |
| Cow position: | chr22:29231187-29231073 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 419-537 |
| Cow position: | chr22:32053383-32053501 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 421-537 |
| Cow position: | chr22:1277078-1277197 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 432-532 |
| Cow position: | chr22:17074393-17074492 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 434-537 |
| Cow position: | chr22:2135800-2135900 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 440-537 |
| Cow position: | chr22:23751150-23751053 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 445-536 |
| Cow position: | chr22:33768164-33768255 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.