Cow genome map
| Conread name: | Pig1-92A03 |
| Conread position: | 310-530 |
| Cow position: | chr27:27867619-27867829 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 76 |
| Conread position: | 312-532 |
| Cow position: | chr27:13005905-13005680 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 69, 18 |
| Conread position: | 312-537 |
| Cow position: | chr27:783770-783532 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 29, 174 |
| Conread position: | 313-518 |
| Cow position: | chr27:465023-464816 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 92, 131 |
| Conread position: | 314-519 |
| Cow position: | chr27:1953049-1953246 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 314-519 |
| Cow position: | chr27:29019688-29019890 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 314-537 |
| Cow position: | chr27:25998766-25998527 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 16 |
| Conread position: | 314-537 |
| Cow position: | chr27:30365375-30365144 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 324-537 |
| Cow position: | chr27:25982675-25982892 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 325-537 |
| Cow position: | chr27:26441007-26441222 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 61, 113 |
| Conread position: | 327-523 |
| Cow position: | chr27:20510247-20510055 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 66 |
| Conread position: | 330-524 |
| Cow position: | chr27:28107153-28107343 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 330-529 |
| Cow position: | chr27:11416496-11416285 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 8 |
| Conread position: | 333-505 |
| Cow position: | chr27:11356492-11356680 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 333-532 |
| Cow position: | chr27:6884067-6883864 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 333-537 |
| Cow position: | chr27:23662562-23662767 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 334-523 |
| Cow position: | chr27:30703031-30703227 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 334-536 |
| Cow position: | chr27:8048697-8048905 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 143 |
| Conread position: | 334-537 |
| Cow position: | chr27:19083669-19083891 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 335-522 |
| Cow position: | chr27:26483270-26483080 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 83 |
| Conread position: | 335-535 |
| Cow position: | chr27:30560958-30560753 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 53, 117 |
| Conread position: | 336-537 |
| Cow position: | chr27:21138866-21138656 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 340-537 |
| Cow position: | chr27:25970430-25970233 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 127 |
| Conread position: | 381-537 |
| Cow position: | chr27:14937443-14937603 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 141 |
| Conread position: | 386-537 |
| Cow position: | chr27:12247660-12247512 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 387-532 |
| Cow position: | chr27:13958364-13958513 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 388-535 |
| Cow position: | chr27:16493560-16493414 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 388-537 |
| Cow position: | chr27:1536740-1536901 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 388-537 |
| Cow position: | chr27:21970907-21971056 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 389-537 |
| Cow position: | chr27:21578595-21578749 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 397-537 |
| Cow position: | chr27:10119109-10119257 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 400-537 |
| Cow position: | chr27:25880068-25879928 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 402-532 |
| Cow position: | chr27:16525880-16526010 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 413-537 |
| Cow position: | chr27:11746542-11746414 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 417-537 |
| Cow position: | chr27:6347805-6347927 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 419-537 |
| Cow position: | chr27:18219341-18219223 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 419-537 |
| Cow position: | chr27:19601316-19601200 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 432-537 |
| Cow position: | chr27:21991461-21991357 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 435-537 |
| Cow position: | chr27:1899644-1899746 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-537 |
| Cow position: | chr27:17875214-17875316 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 452-537 |
| Cow position: | chr27:9692106-9692191 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 75 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.