Cow genome map
| Conread name: | Pig1-92A03 | 
| Conread position: | 293-537 | 
| Cow position: | chr3:23111661-23111406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 19, 27 | 
| Conread position: | 304-524 | 
| Cow position: | chr3:53538377-53538605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 7, 152 | 
| Conread position: | 311-518 | 
| Cow position: | chr3:17742369-17742578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 20, 8 | 
| Conread position: | 311-526 | 
| Cow position: | chr3:53091357-53091582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 70, 19 | 
| Conread position: | 313-532 | 
| Cow position: | chr3:70354361-70354137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 15, 45 | 
| Conread position: | 314-520 | 
| Cow position: | chr3:58865589-58865384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 76, 16 | 
| Conread position: | 314-524 | 
| Cow position: | chr3:71135663-71135880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 67, 16 | 
| Conread position: | 314-532 | 
| Cow position: | chr3:34086167-34085954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 83, 16 | 
| Conread position: | 314-533 | 
| Cow position: | chr3:54862546-54862317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 67, 23 | 
| Conread position: | 314-537 | 
| Cow position: | chr3:1300104-1300322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 89, 16 | 
| Conread position: | 314-537 | 
| Cow position: | chr3:20092644-20092419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 73, 16 | 
| Conread position: | 314-537 | 
| Cow position: | chr3:22953993-22953777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 27, 82 | 
| Conread position: | 314-537 | 
| Cow position: | chr3:53588516-53588278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 74, 16 | 
| Conread position: | 315-532 | 
| Cow position: | chr3:46094702-46094923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 101, 160 | 
| Conread position: | 315-536 | 
| Cow position: | chr3:37451939-37452175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 65, 23 | 
| Conread position: | 319-518 | 
| Cow position: | chr3:66738653-66738846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 63, 11 | 
| Conread position: | 323-530 | 
| Cow position: | chr3:51255666-51255879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 58, 15 | 
| Conread position: | 323-532 | 
| Cow position: | chr3:25090921-25091131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 19, 40 | 
| Conread position: | 323-536 | 
| Cow position: | chr3:32597049-32596839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 69, 20 | 
| Conread position: | 325-524 | 
| Cow position: | chr3:83396076-83396275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 65, 13 | 
| Conread position: | 325-534 | 
| Cow position: | chr3:20471484-20471261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 61, 35 | 
| Conread position: | 325-537 | 
| Cow position: | chr3:8923924-8924147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 65, 174 | 
| Conread position: | 326-537 | 
| Cow position: | chr3:4329223-4329426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 71, 23 | 
| Conread position: | 327-515 | 
| Cow position: | chr3:62884085-62884288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 330-523 | 
| Cow position: | chr3:82473943-82474133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 67, 8 | 
| Conread position: | 330-524 | 
| Cow position: | chr3:17284729-17284921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 330-524 | 
| Cow position: | chr3:35018958-35018773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 68, 56 | 
| Conread position: | 330-524 | 
| Cow position: | chr3:58350472-58350665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 59, 87 | 
| Conread position: | 330-524 | 
| Cow position: | chr3:73777169-73777364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 56, 8 | 
| Conread position: | 330-532 | 
| Cow position: | chr3:22271547-22271353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 68, 8 | 
| Conread position: | 330-534 | 
| Cow position: | chr3:29507474-29507685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 27, 43 | 
| Conread position: | 330-537 | 
| Cow position: | chr3:23476887-23477097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 58, 8 | 
| Conread position: | 330-537 | 
| Cow position: | chr3:25250794-25251011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 53, 8 | 
| Conread position: | 330-537 | 
| Cow position: | chr3:52835998-52835774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 333-523 | 
| Cow position: | chr3:20405687-20405878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 21, 78 | 
| Conread position: | 333-524 | 
| Cow position: | chr3:33633007-33632815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 11, 110 | 
| Conread position: | 333-531 | 
| Cow position: | chr3:61322730-61322941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 333-532 | 
| Cow position: | chr3:13909400-13909599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 53, 19 | 
| Conread position: | 333-532 | 
| Cow position: | chr3:73741968-73741768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 51, 23 | 
| Conread position: | 333-534 | 
| Cow position: | chr3:8457541-8457758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 333-537 | 
| Cow position: | chr3:23092091-23091872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 53, 177 | 
| Conread position: | 333-537 | 
| Cow position: | chr3:36204442-36204659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 57, 32 | 
| Conread position: | 333-537 | 
| Cow position: | chr3:54340525-54340316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 50, 38 | 
| Conread position: | 334-522 | 
| Cow position: | chr3:26493333-26493139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 334-524 | 
| Cow position: | chr3:74561523-74561330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 11, 115 | 
| Conread position: | 335-523 | 
| Cow position: | chr3:4223202-4223392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 52, 95 | 
| Conread position: | 345-537 | 
| Cow position: | chr3:58286000-58285802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 40, 132 | 
| Conread position: | 346-525 | 
| Cow position: | chr3:66145814-66145994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 44, 95 | 
| Conread position: | 346-537 | 
| Cow position: | chr3:30839160-30839349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 51, 98 | 
| Conread position: | 380-536 | 
| Cow position: | chr3:55373620-55373463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 380-537 | 
| Cow position: | chr3:14505970-14505808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 380-537 | 
| Cow position: | chr3:74205860-74205702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 381-532 | 
| Cow position: | chr3:41550429-41550274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 16, 121 | 
| Conread position: | 383-505 | 
| Cow position: | chr3:15684974-15684847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 15, 32 | 
| Conread position: | 383-532 | 
| Cow position: | chr3:9074398-9074244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 383-536 | 
| Cow position: | chr3:39911106-39910954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 383-537 | 
| Cow position: | chr3:61411076-61411227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 385-537 | 
| Cow position: | chr3:51146716-51146565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 12, 33 | 
| Conread position: | 387-535 | 
| Cow position: | chr3:50462292-50462441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 387-537 | 
| Cow position: | chr3:50281798-50281645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 36, 16 | 
| Conread position: | 388-530 | 
| Cow position: | chr3:8752740-8752886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 10, 111 | 
| Conread position: | 388-532 | 
| Cow position: | chr3:58448106-58447964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 388-535 | 
| Cow position: | chr3:9629840-9629985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 10, 84 | 
| Conread position: | 388-537 | 
| Cow position: | chr3:3736251-3736406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 388-537 | 
| Cow position: | chr3:10431557-10431706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 9, 53 | 
| Conread position: | 388-537 | 
| Cow position: | chr3:41718349-41718498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 9, 53 | 
| Conread position: | 388-537 | 
| Cow position: | chr3:58174861-58175006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 9, 112 | 
| Conread position: | 388-537 | 
| Cow position: | chr3:73436488-73436334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 388-537 | 
| Cow position: | chr3:74611520-74611670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 388-537 | 
| Cow position: | chr3:77490532-77490676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 389-532 | 
| Cow position: | chr3:31933142-31932998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 389-537 | 
| Cow position: | chr3:6690209-6690357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 9, 43 | 
| Conread position: | 390-532 | 
| Cow position: | chr3:18214185-18214034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 392-505 | 
| Cow position: | chr3:44861351-44861237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 393-521 | 
| Cow position: | chr3:66708108-66707976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 395-524 | 
| Cow position: | chr3:49428020-49427891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 395-531 | 
| Cow position: | chr3:58632527-58632662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 396-535 | 
| Cow position: | chr3:27532692-27532550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 47, 27 | 
| Conread position: | 396-537 | 
| Cow position: | chr3:5419898-5419757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 396-537 | 
| Cow position: | chr3:15221556-15221411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 396-537 | 
| Cow position: | chr3:25076205-25076060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 397-534 | 
| Cow position: | chr3:59608465-59608606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 397-537 | 
| Cow position: | chr3:891231-891371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 397-537 | 
| Cow position: | chr3:55991902-55991762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 70, 121 | 
| Conread position: | 400-534 | 
| Cow position: | chr3:11920066-11919933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 41, 90 | 
| Conread position: | 401-537 | 
| Cow position: | chr3:24538843-24538979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 406-497 | 
| Cow position: | chr3:77191033-77191123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 92 | 
| Alignm identity: | 79 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 411-537 | 
| Cow position: | chr3:24300337-24300467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 413-532 | 
| Cow position: | chr3:58291910-58291791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 413-537 | 
| Cow position: | chr3:5844902-5845025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 104, 0 | 
| Conread position: | 414-537 | 
| Cow position: | chr3:43654130-43654012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 417-532 | 
| Cow position: | chr3:31750258-31750370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 419-519 | 
| Cow position: | chr3:61116415-61116316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 101 | 
| Alignm identity: | 85 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 420-521 | 
| Cow position: | chr3:20158385-20158486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 103 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 24, 80 | 
| Conread position: | 421-537 | 
| Cow position: | chr3:34315831-34315716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 426-537 | 
| Cow position: | chr3:62628268-62628158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 428-537 | 
| Cow position: | chr3:25027399-25027508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 431-536 | 
| Cow position: | chr3:84112580-84112475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 106 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 432-537 | 
| Cow position: | chr3:74912855-74912960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 106 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
Show alignments to all cow chromosomes.
