Cow genome map

Conread name: Pig1-92A03

Conread position: 293-537
Cow position: chr3:23111661-23111406 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 27

Conread position: 304-524
Cow position: chr3:53538377-53538605 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 7, 152

Conread position: 311-518
Cow position: chr3:17742369-17742578 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 8

Conread position: 311-526
Cow position: chr3:53091357-53091582 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 19

Conread position: 313-532
Cow position: chr3:70354361-70354137 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 45

Conread position: 314-520
Cow position: chr3:58865589-58865384 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 76, 16

Conread position: 314-524
Cow position: chr3:71135663-71135880 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 16

Conread position: 314-532
Cow position: chr3:34086167-34085954 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 16

Conread position: 314-533
Cow position: chr3:54862546-54862317 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 23

Conread position: 314-537
Cow position: chr3:1300104-1300322 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 89, 16

Conread position: 314-537
Cow position: chr3:20092644-20092419 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 73, 16

Conread position: 314-537
Cow position: chr3:22953993-22953777 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 27, 82

Conread position: 314-537
Cow position: chr3:53588516-53588278 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 74, 16

Conread position: 315-532
Cow position: chr3:46094702-46094923 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 101, 160

Conread position: 315-536
Cow position: chr3:37451939-37452175 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 23

Conread position: 319-518
Cow position: chr3:66738653-66738846 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 11

Conread position: 323-530
Cow position: chr3:51255666-51255879 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 15

Conread position: 323-532
Cow position: chr3:25090921-25091131 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 40

Conread position: 323-536
Cow position: chr3:32597049-32596839 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 20

Conread position: 325-524
Cow position: chr3:83396076-83396275 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 65, 13

Conread position: 325-534
Cow position: chr3:20471484-20471261 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 35

Conread position: 325-537
Cow position: chr3:8923924-8924147 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 65, 174

Conread position: 326-537
Cow position: chr3:4329223-4329426 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 71, 23

Conread position: 327-515
Cow position: chr3:62884085-62884288 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 330-523
Cow position: chr3:82473943-82474133 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 8

Conread position: 330-524
Cow position: chr3:17284729-17284921 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 330-524
Cow position: chr3:35018958-35018773 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 56

Conread position: 330-524
Cow position: chr3:58350472-58350665 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 87

Conread position: 330-524
Cow position: chr3:73777169-73777364 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 8

Conread position: 330-532
Cow position: chr3:22271547-22271353 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 68, 8

Conread position: 330-534
Cow position: chr3:29507474-29507685 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 43

Conread position: 330-537
Cow position: chr3:23476887-23477097 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 58, 8

Conread position: 330-537
Cow position: chr3:25250794-25251011 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 8

Conread position: 330-537
Cow position: chr3:52835998-52835774 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 333-523
Cow position: chr3:20405687-20405878 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 78

Conread position: 333-524
Cow position: chr3:33633007-33632815 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 110

Conread position: 333-531
Cow position: chr3:61322730-61322941 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 333-532
Cow position: chr3:13909400-13909599 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 19

Conread position: 333-532
Cow position: chr3:73741968-73741768 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 23

Conread position: 333-534
Cow position: chr3:8457541-8457758 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 333-537
Cow position: chr3:23092091-23091872 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 177

Conread position: 333-537
Cow position: chr3:36204442-36204659 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 32

Conread position: 333-537
Cow position: chr3:54340525-54340316 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 38

Conread position: 334-522
Cow position: chr3:26493333-26493139 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 334-524
Cow position: chr3:74561523-74561330 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 115

Conread position: 335-523
Cow position: chr3:4223202-4223392 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 95

Conread position: 345-537
Cow position: chr3:58286000-58285802 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 40, 132

Conread position: 346-525
Cow position: chr3:66145814-66145994 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 95

Conread position: 346-537
Cow position: chr3:30839160-30839349 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 98

Conread position: 380-536
Cow position: chr3:55373620-55373463 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 380-537
Cow position: chr3:14505970-14505808 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 380-537
Cow position: chr3:74205860-74205702 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 381-532
Cow position: chr3:41550429-41550274 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 16, 121

Conread position: 383-505
Cow position: chr3:15684974-15684847 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 32

Conread position: 383-532
Cow position: chr3:9074398-9074244 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 383-536
Cow position: chr3:39911106-39910954 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 134, 0

Conread position: 383-537
Cow position: chr3:61411076-61411227 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 385-537
Cow position: chr3:51146716-51146565 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 33

Conread position: 387-535
Cow position: chr3:50462292-50462441 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 387-537
Cow position: chr3:50281798-50281645 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 16

Conread position: 388-530
Cow position: chr3:8752740-8752886 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 111

Conread position: 388-532
Cow position: chr3:58448106-58447964 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 388-535
Cow position: chr3:9629840-9629985 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 84

Conread position: 388-537
Cow position: chr3:3736251-3736406 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 388-537
Cow position: chr3:10431557-10431706 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 9, 53

Conread position: 388-537
Cow position: chr3:41718349-41718498 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 9, 53

Conread position: 388-537
Cow position: chr3:58174861-58175006 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 112

Conread position: 388-537
Cow position: chr3:73436488-73436334 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 388-537
Cow position: chr3:74611520-74611670 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 388-537
Cow position: chr3:77490532-77490676 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 389-532
Cow position: chr3:31933142-31932998 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 389-537
Cow position: chr3:6690209-6690357 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 9, 43

Conread position: 390-532
Cow position: chr3:18214185-18214034 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 392-505
Cow position: chr3:44861351-44861237 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 393-521
Cow position: chr3:66708108-66707976 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 395-524
Cow position: chr3:49428020-49427891 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 395-531
Cow position: chr3:58632527-58632662 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 396-535
Cow position: chr3:27532692-27532550 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 27

Conread position: 396-537
Cow position: chr3:5419898-5419757 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 396-537
Cow position: chr3:15221556-15221411 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 396-537
Cow position: chr3:25076205-25076060 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 397-534
Cow position: chr3:59608465-59608606 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 397-537
Cow position: chr3:891231-891371 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 397-537
Cow position: chr3:55991902-55991762 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 121
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 121

Conread position: 400-534
Cow position: chr3:11920066-11919933 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 90

Conread position: 401-537
Cow position: chr3:24538843-24538979 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 115
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 406-497
Cow position: chr3:77191033-77191123 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 411-537
Cow position: chr3:24300337-24300467 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 413-532
Cow position: chr3:58291910-58291791 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 413-537
Cow position: chr3:5844902-5845025 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 414-537
Cow position: chr3:43654130-43654012 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 417-532
Cow position: chr3:31750258-31750370 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 419-519
Cow position: chr3:61116415-61116316 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 420-521
Cow position: chr3:20158385-20158486 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 80

Conread position: 421-537
Cow position: chr3:34315831-34315716 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 426-537
Cow position: chr3:62628268-62628158 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 428-537
Cow position: chr3:25027399-25027508 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 431-536
Cow position: chr3:84112580-84112475 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 432-537
Cow position: chr3:74912855-74912960 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.