Cow genome map
| Conread name: | Pig2-101K22 |
| Conread position: | 167-356 |
| Cow position: | chr1:24229941-24229753 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 169, 91 |
| Conread position: | 176-362 |
| Cow position: | chr1:79931259-79931084 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 176-495 |
| Cow position: | chr1:13797927-13797597 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 187, 82 |
| Conread position: | 177-311 |
| Cow position: | chr1:87737370-87737508 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 177-326 |
| Cow position: | chr1:28469932-28469786 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 177-346 |
| Cow position: | chr1:70256754-70256586 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 177-356 |
| Cow position: | chr1:4269471-4269294 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 177-369 |
| Cow position: | chr1:60452331-60452523 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 30, 82 |
| Conread position: | 177-388 |
| Cow position: | chr1:7435023-7434808 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 86, 81 |
| Conread position: | 177-396 |
| Cow position: | chr1:81469011-81469228 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 187, 43 |
| Conread position: | 177-476 |
| Cow position: | chr1:78728736-78728421 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 172, 81 |
| Conread position: | 177-496 |
| Cow position: | chr1:76660348-76660688 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 19, 177 |
| Conread position: | 177-501 |
| Cow position: | chr1:9147716-9147380 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 188, 81 |
| Conread position: | 178-349 |
| Cow position: | chr1:91840787-91840957 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 178-389 |
| Cow position: | chr1:82422780-82422992 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 86, 81 |
| Conread position: | 183-316 |
| Cow position: | chr1:93131126-93131258 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 183-346 |
| Cow position: | chr1:17467463-17467624 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 183-356 |
| Cow position: | chr1:6971783-6971955 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 24, 77 |
| Conread position: | 183-387 |
| Cow position: | chr1:93579823-93580022 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 197, 75 |
| Conread position: | 183-389 |
| Cow position: | chr1:39066946-39067148 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 155, 75 |
| Conread position: | 183-389 |
| Cow position: | chr1:91819402-91819611 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 180, 75 |
| Conread position: | 186-349 |
| Cow position: | chr1:93441052-93440888 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 21, 74 |
| Conread position: | 186-351 |
| Cow position: | chr1:22605550-22605710 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 186-356 |
| Cow position: | chr1:22442479-22442649 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 186-356 |
| Cow position: | chr1:25222845-25223007 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 187-306 |
| Cow position: | chr1:89939070-89939188 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 197-369 |
| Cow position: | chr1:8319237-8319067 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 198-304 |
| Cow position: | chr1:70310002-70309898 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 200-496 |
| Cow position: | chr1:93571566-93571881 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 164, 58 |
| Conread position: | 202-358 |
| Cow position: | chr1:96313227-96313072 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 208-349 |
| Cow position: | chr1:44128873-44129013 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.