Cow genome map
| Conread name: | Pig2-101K22 |
| Conread position: | 175-353 |
| Cow position: | chr11:75129610-75129787 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 175-485 |
| Cow position: | chr11:85701856-85701542 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 202, 83 |
| Conread position: | 176-356 |
| Cow position: | chr11:433330-433157 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 176-386 |
| Cow position: | chr11:48074255-48074040 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 176-389 |
| Cow position: | chr11:36397364-36397153 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 176-497 |
| Cow position: | chr11:50040686-50040370 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 82 |
| Conread position: | 177-345 |
| Cow position: | chr11:59969726-59969557 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 68, 82 |
| Conread position: | 177-346 |
| Cow position: | chr11:58355759-58355596 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 177-363 |
| Cow position: | chr11:30474137-30473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 177-369 |
| Cow position: | chr11:3612579-3612401 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 178-501 |
| Cow position: | chr11:18139139-18139476 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 157, 80 |
| Conread position: | 183-356 |
| Cow position: | chr11:61469584-61469411 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 62 |
| Conread position: | 183-362 |
| Cow position: | chr11:63283330-63283157 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 183-362 |
| Cow position: | chr11:83551726-83551548 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 28, 76 |
| Conread position: | 183-369 |
| Cow position: | chr11:71161697-71161880 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 183-397 |
| Cow position: | chr11:37328365-37328153 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 174, 19 |
| Conread position: | 186-313 |
| Cow position: | chr11:75167638-75167764 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 186-353 |
| Cow position: | chr11:14191384-14191553 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 54, 75 |
| Conread position: | 186-360 |
| Cow position: | chr11:35745716-35745549 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 153, 15 |
| Conread position: | 189-354 |
| Cow position: | chr11:63667182-63667019 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 195-496 |
| Cow position: | chr11:58354922-58354613 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 144, 63 |
| Conread position: | 196-309 |
| Cow position: | chr11:7549100-7549212 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 198-485 |
| Cow position: | chr11:83266184-83266484 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 123, 60 |
| Conread position: | 199-400 |
| Cow position: | chr11:65753044-65753250 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 118, 60 |
| Conread position: | 205-387 |
| Cow position: | chr11:18179938-18180121 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 151, 53 |
| Conread position: | 206-358 |
| Cow position: | chr11:55183515-55183666 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 132, 53 |
| Conread position: | 206-362 |
| Cow position: | chr11:40582524-40582673 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 218-393 |
| Cow position: | chr11:68169383-68169564 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 126 |
| Conread position: | 221-356 |
| Cow position: | chr11:6887063-6887197 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 223-436 |
| Cow position: | chr11:31815465-31815260 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 139, 35 |
| Conread position: | 225-381 |
| Cow position: | chr11:33189953-33190111 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 140, 30 |
Show alignments to all cow chromosomes.