Cow genome map
| Conread name: | Pig2-101K22 |
| Conread position: | 175-356 |
| Cow position: | chr5:63252274-63252453 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 147 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 176-356 |
| Cow position: | chr5:45196590-45196414 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 149 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 176-418 |
| Cow position: | chr5:49610043-49609806 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 111, 40 |
| Conread position: | 177-333 |
| Cow position: | chr5:59042638-59042792 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 5, 10 |
| Conread position: | 177-350 |
| Cow position: | chr5:47837977-47838150 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 142 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 177-356 |
| Cow position: | chr5:44697042-44697219 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 150, 23 |
| Conread position: | 177-363 |
| Cow position: | chr5:34025003-34024819 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 177-393 |
| Cow position: | chr5:16177202-16177421 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 188, 81 |
| Conread position: | 183-306 |
| Cow position: | chr5:64185365-64185249 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 183-356 |
| Cow position: | chr5:56269587-56269415 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 183-387 |
| Cow position: | chr5:63793659-63793859 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 183-389 |
| Cow position: | chr5:9520359-9520559 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 164, 23 |
| Conread position: | 185-357 |
| Cow position: | chr5:3396580-3396750 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 140 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 186-349 |
| Cow position: | chr5:51822755-51822592 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 73 |
| Conread position: | 187-334 |
| Cow position: | chr5:59096581-59096726 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 187-344 |
| Cow position: | chr5:47460053-47459901 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 197-366 |
| Cow position: | chr5:49879282-49879116 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 141, 35 |
| Conread position: | 198-356 |
| Cow position: | chr5:59053388-59053545 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 206-356 |
| Cow position: | chr5:59044942-59045091 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 210-397 |
| Cow position: | chr5:63395467-63395277 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 212-359 |
| Cow position: | chr5:39324566-39324420 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 220-496 |
| Cow position: | chr5:20848256-20847961 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 139, 38 |
| Conread position: | 221-363 |
| Cow position: | chr5:57628824-57628683 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 254-495 |
| Cow position: | chr5:9887268-9887528 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 108, 245 |
Show alignments to all cow chromosomes.