Cow genome map
| Conread name: | Pig2-102I04 |
| Conread position: | 1-121 |
| Cow position: | chr18:35950081-35950207 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-124 |
| Cow position: | chr18:37690195-37690316 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-93 |
| Cow position: | chr18:2774091-2774002 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-119 |
| Cow position: | chr18:28540065-28539950 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 3-124 |
| Cow position: | chr18:2144618-2144735 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-129 |
| Cow position: | chr18:697175-697049 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-124 |
| Cow position: | chr18:40028266-40028389 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 5-95 |
| Cow position: | chr18:23821783-23821693 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 80 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-117 |
| Cow position: | chr18:47417046-47417158 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-120 |
| Cow position: | chr18:2108296-2108409 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 13 |
| Conread position: | 5-120 |
| Cow position: | chr18:7965278-7965393 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-121 |
| Cow position: | chr18:1735549-1735436 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 5-121 |
| Cow position: | chr18:32960126-32960241 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 5-121 |
| Cow position: | chr18:52251808-52251692 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-121 |
| Cow position: | chr18:52382953-52383069 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 65 |
| Conread position: | 5-124 |
| Cow position: | chr18:14871556-14871439 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 5-124 |
| Cow position: | chr18:35171397-35171514 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 5-124 |
| Cow position: | chr18:37031878-37031997 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-124 |
| Cow position: | chr18:38211205-38211324 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-124 |
| Cow position: | chr18:45573429-45573546 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 5-128 |
| Cow position: | chr18:5632317-5632434 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 5-129 |
| Cow position: | chr18:51976069-51976192 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 5-130 |
| Cow position: | chr18:22045365-22045240 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-130 |
| Cow position: | chr18:52387171-52387047 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 5-131 |
| Cow position: | chr18:21751427-21751552 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 5-131 |
| Cow position: | chr18:35235974-35235848 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 120, 33 |
| Conread position: | 5-131 |
| Cow position: | chr18:44514135-44514262 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 5-131 |
| Cow position: | chr18:53053185-53053056 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 5-132 |
| Cow position: | chr18:19796874-19796744 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 5-139 |
| Cow position: | chr18:56155562-56155696 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-118 |
| Cow position: | chr18:3412411-3412523 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-119 |
| Cow position: | chr18:48112917-48112805 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 109, 32 |
| Conread position: | 6-121 |
| Cow position: | chr18:55692866-55692980 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-124 |
| Cow position: | chr18:20391256-20391371 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 8-122 |
| Cow position: | chr18:39662829-39662944 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 9-121 |
| Cow position: | chr18:31557107-31556995 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-121 |
| Cow position: | chr18:51757146-51757256 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 9-124 |
| Cow position: | chr18:7956201-7956314 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 9-124 |
| Cow position: | chr18:8208372-8208258 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 9-124 |
| Cow position: | chr18:10214137-10214026 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 9-127 |
| Cow position: | chr18:5189640-5189523 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 9-131 |
| Cow position: | chr18:3164461-3164341 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 9-131 |
| Cow position: | chr18:4537520-4537401 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 9-131 |
| Cow position: | chr18:4538232-4538113 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 9-131 |
| Cow position: | chr18:34389331-34389208 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 10-124 |
| Cow position: | chr18:21528702-21528815 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 10-124 |
| Cow position: | chr18:26354991-26354876 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 11-124 |
| Cow position: | chr18:29371922-29372035 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-128 |
| Cow position: | chr18:27078919-27079036 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-129 |
| Cow position: | chr18:39623855-39623974 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 11-131 |
| Cow position: | chr18:238061-237941 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-131 |
| Cow position: | chr18:42438104-42437985 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 12-124 |
| Cow position: | chr18:23810064-23809956 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 12-124 |
| Cow position: | chr18:50959542-50959654 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-127 |
| Cow position: | chr18:29945592-29945704 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 12-131 |
| Cow position: | chr18:16659376-16659256 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 16-127 |
| Cow position: | chr18:51396439-51396329 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 32-131 |
| Cow position: | chr18:30385439-30385339 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
Show alignments to all cow chromosomes.