Cow genome map

Conread name: Pig2-102I04

Conread position: 1-121
Cow position: chr2:44313640-44313520 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr2:6267690-6267567 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-111
Cow position: chr2:16332127-16332235 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 2-141
Cow position: chr2:29974718-29974577 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 3-113
Cow position: chr2:16669549-16669658 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 3-114
Cow position: chr2:29394928-29394817 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-117
Cow position: chr2:40597650-40597764 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-119
Cow position: chr2:78116282-78116166 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-120
Cow position: chr2:39864504-39864621 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr2:2437529-2437414 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 3-121
Cow position: chr2:59396973-59396855 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-122
Cow position: chr2:69579598-69579479 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr2:10628455-10628333 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 3-124
Cow position: chr2:46053551-46053672 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr2:58070073-58070194 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-124
Cow position: chr2:70771802-70771679 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 3-127
Cow position: chr2:3728107-3728225 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 3-127
Cow position: chr2:5300677-5300800 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 3-128
Cow position: chr2:46202344-46202470 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 17

Conread position: 3-129
Cow position: chr2:13468296-13468420 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 3-129
Cow position: chr2:22759897-22759770 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 3-129
Cow position: chr2:33711908-33711778 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 3-130
Cow position: chr2:74198250-74198122 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 3-131
Cow position: chr2:32660258-32660387 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 3-131
Cow position: chr2:67810962-67810834 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 110
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 4-124
Cow position: chr2:11163145-11163023 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 21

Conread position: 5-116
Cow position: chr2:39483566-39483677 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr2:47165749-47165636 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 5-120
Cow position: chr2:1410054-1409939 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-120
Cow position: chr2:38662619-38662501 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 5-120
Cow position: chr2:66027639-66027754 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr2:2098230-2098115 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 80

Conread position: 5-121
Cow position: chr2:6039096-6039211 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 5-121
Cow position: chr2:9062760-9062876 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr2:15348476-15348592 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr2:19211974-19211865 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 5-121
Cow position: chr2:54700539-54700653 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 5-121
Cow position: chr2:56021394-56021511 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 33

Conread position: 5-124
Cow position: chr2:1364516-1364398 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 5-124
Cow position: chr2:16513935-16514054 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr2:35934963-35935088 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 5-124
Cow position: chr2:44063693-44063579 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 5-124
Cow position: chr2:67480058-67480186 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 5-127
Cow position: chr2:31355780-31355901 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 5-128
Cow position: chr2:27178727-27178850 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-128
Cow position: chr2:36376941-36377063 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 5-130
Cow position: chr2:38700299-38700177 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 5-130
Cow position: chr2:49345075-49345199 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 5-130
Cow position: chr2:55387648-55387774 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 5-131
Cow position: chr2:15058981-15058857 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 5-131
Cow position: chr2:38953906-38954039 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 5-131
Cow position: chr2:45799847-45799720 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 36, 24

Conread position: 5-131
Cow position: chr2:67302099-67302224 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 5-131
Cow position: chr2:68328770-68328646 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 5-131
Cow position: chr2:75331745-75331619 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-121
Cow position: chr2:81913081-81913195 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 7-119
Cow position: chr2:49717004-49716892 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr2:67595933-67595821 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr2:36124517-36124632 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr2:69109262-69109146 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 10-111
Cow position: chr2:46204604-46204705 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-120
Cow position: chr2:82374519-82374630 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 10-128
Cow position: chr2:8843741-8843621 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 10-129
Cow position: chr2:13369742-13369862 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 115, 0

Conread position: 10-130
Cow position: chr2:50862491-50862611 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr2:35299416-35299537 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr2:69780082-69779962 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 10-131
Cow position: chr2:72359547-72359425 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 11-124
Cow position: chr2:9726014-9725901 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 9

Conread position: 11-124
Cow position: chr2:41351097-41350986 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 44

Conread position: 11-124
Cow position: chr2:73923901-73924014 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-127
Cow position: chr2:33560587-33560472 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 11-127
Cow position: chr2:44022717-44022601 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-130
Cow position: chr2:44215590-44215705 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 11-131
Cow position: chr2:25284124-25284243 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 11-131
Cow position: chr2:29290228-29290112 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 11-131
Cow position: chr2:35466448-35466329 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 11-131
Cow position: chr2:70598640-70598765 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 97

Conread position: 11-132
Cow position: chr2:67745331-67745456 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 11-135
Cow position: chr2:49862742-49862865 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 12-124
Cow position: chr2:84344060-84343949 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 12-128
Cow position: chr2:19104700-19104592 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 12-128
Cow position: chr2:76313779-76313663 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-129
Cow position: chr2:19017541-19017659 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 12-130
Cow position: chr2:28452856-28452744 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 12-133
Cow position: chr2:13544078-13544196 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 13-120
Cow position: chr2:42897756-42897863 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-124
Cow position: chr2:14218742-14218853 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-130
Cow position: chr2:40508506-40508387 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 13-131
Cow position: chr2:42476142-42476028 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 14-124
Cow position: chr2:72315721-72315613 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 15-129
Cow position: chr2:23935485-23935597 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 399-498
Cow position: chr2:4675425-4675322 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.