Cow genome map
| Conread name: | Pig2-102I04 |
| Conread position: | 1-124 |
| Cow position: | chr27:21101412-21101534 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 3-113 |
| Cow position: | chr27:23554450-23554560 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-117 |
| Cow position: | chr27:28896757-28896643 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-120 |
| Cow position: | chr27:30914886-30914769 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-121 |
| Cow position: | chr27:10979739-10979621 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-124 |
| Cow position: | chr27:26793907-26794026 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-124 |
| Cow position: | chr27:31443932-31443814 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 3-129 |
| Cow position: | chr27:5553346-5553224 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 120, 76 |
| Conread position: | 3-131 |
| Cow position: | chr27:21978263-21978392 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 3-131 |
| Cow position: | chr27:29308223-29308095 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 3-132 |
| Cow position: | chr27:31373093-31373222 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-131 |
| Cow position: | chr27:28254114-28253987 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-115 |
| Cow position: | chr27:2592416-2592304 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 5-120 |
| Cow position: | chr27:11982771-11982886 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-121 |
| Cow position: | chr27:672542-672425 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 5-121 |
| Cow position: | chr27:24303821-24303704 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 95 |
| Conread position: | 5-121 |
| Cow position: | chr27:28472816-28472932 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-124 |
| Cow position: | chr27:10404240-10404359 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-124 |
| Cow position: | chr27:11208680-11208799 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-124 |
| Cow position: | chr27:19074147-19074265 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 5-124 |
| Cow position: | chr27:20266351-20266468 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 5-124 |
| Cow position: | chr27:26481319-26481439 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 5-125 |
| Cow position: | chr27:26112041-26112161 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-127 |
| Cow position: | chr27:31157686-31157564 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 118, 15 |
| Conread position: | 5-130 |
| Cow position: | chr27:19779751-19779629 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 5-131 |
| Cow position: | chr27:24331595-24331466 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 60, 122 |
| Conread position: | 5-131 |
| Cow position: | chr27:26467684-26467811 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 9-121 |
| Cow position: | chr27:14269455-14269569 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 9-129 |
| Cow position: | chr27:18558231-18558111 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-125 |
| Cow position: | chr27:18791642-18791757 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-131 |
| Cow position: | chr27:20785993-20785872 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-131 |
| Cow position: | chr27:20825921-20826046 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 10-131 |
| Cow position: | chr27:29877604-29877725 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-124 |
| Cow position: | chr27:22614729-22614613 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 11-129 |
| Cow position: | chr27:9504424-9504306 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-131 |
| Cow position: | chr27:16275811-16275929 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 11-131 |
| Cow position: | chr27:20045762-20045647 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 11-131 |
| Cow position: | chr27:21054328-21054208 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-124 |
| Cow position: | chr27:6752048-6751936 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-131 |
| Cow position: | chr27:10323713-10323595 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 13-124 |
| Cow position: | chr27:23232781-23232670 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-133 |
| Cow position: | chr27:27012565-27012443 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 15-124 |
| Cow position: | chr27:27438641-27438750 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-127 |
| Cow position: | chr27:27740427-27740538 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-128 |
| Cow position: | chr27:30374720-30374827 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 87 |
| Conread position: | 20-130 |
| Cow position: | chr27:18543848-18543740 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.