Cow genome map
Conread name: | Pig2-102I04 |
Conread position: | 1-122 |
Cow position: | chr5:35247006-35246884 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 3-119 |
Cow position: | chr5:54555081-54554965 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 100 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 31, 38 |
Conread position: | 3-124 |
Cow position: | chr5:36868841-36868962 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 91, 106 |
Conread position: | 3-128 |
Cow position: | chr5:42064311-42064436 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 97 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-130 |
Cow position: | chr5:26097395-26097522 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 109, 37 |
Conread position: | 3-131 |
Cow position: | chr5:62543945-62544069 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 5-113 |
Cow position: | chr5:53980646-53980538 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 90 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-119 |
Cow position: | chr5:57526821-57526707 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 91 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-119 |
Cow position: | chr5:62011791-62011902 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 93 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 5-120 |
Cow position: | chr5:24108952-24108837 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 94 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-120 |
Cow position: | chr5:37572450-37572335 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 91 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-120 |
Cow position: | chr5:41935549-41935434 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 92 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-121 |
Cow position: | chr5:58825-58708 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 5-121 |
Cow position: | chr5:26149142-26149257 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 92 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 5-121 |
Cow position: | chr5:29256601-29256486 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 5-121 |
Cow position: | chr5:43434896-43434780 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-121 |
Cow position: | chr5:43839891-43839775 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-121 |
Cow position: | chr5:49821536-49821653 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 5-121 |
Cow position: | chr5:51012108-51012222 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 5-121 |
Cow position: | chr5:56643175-56643290 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 98 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 63, 44 |
Conread position: | 5-121 |
Cow position: | chr5:58519308-58519194 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 5-121 |
Cow position: | chr5:63763772-63763887 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 96 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 5-121 |
Cow position: | chr5:65140407-65140522 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 5-124 |
Cow position: | chr5:7057294-7057172 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 100 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 5-124 |
Cow position: | chr5:34347627-34347508 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-124 |
Cow position: | chr5:40122502-40122383 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 92 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-124 |
Cow position: | chr5:40740221-40740101 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 97 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 5-124 |
Cow position: | chr5:45854605-45854726 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 100 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 5-124 |
Cow position: | chr5:50723154-50723273 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-124 |
Cow position: | chr5:54340874-54340991 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 5-124 |
Cow position: | chr5:55943608-55943493 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 5-124 |
Cow position: | chr5:58487483-58487598 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 98 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 5-124 |
Cow position: | chr5:61593372-61593489 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 97 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 5-124 |
Cow position: | chr5:62996065-62996184 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 94 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-124 |
Cow position: | chr5:72867158-72867277 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-128 |
Cow position: | chr5:50703941-50703818 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-129 |
Cow position: | chr5:60514921-60514795 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 99 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 5-130 |
Cow position: | chr5:17062973-17062849 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 96 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 5-131 |
Cow position: | chr5:12902025-12902151 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 103 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-131 |
Cow position: | chr5:35229035-35228912 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 102 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 5-131 |
Cow position: | chr5:44582661-44582528 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 104 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 5-131 |
Cow position: | chr5:44810131-44810005 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-131 |
Cow position: | chr5:55783855-55783729 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-131 |
Cow position: | chr5:55949571-55949446 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 103 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 5-131 |
Cow position: | chr5:57399145-57399019 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 103 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-131 |
Cow position: | chr5:57447558-57447432 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 106 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-114 |
Cow position: | chr5:56428465-56428357 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 92 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-121 |
Cow position: | chr5:17987786-17987671 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 99 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 96, 101 |
Conread position: | 6-121 |
Cow position: | chr5:35208370-35208485 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 90 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-121 |
Cow position: | chr5:56624408-56624292 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 99 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 6-121 |
Cow position: | chr5:61049441-61049556 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-137 |
Cow position: | chr5:57687471-57687342 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 98 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-124 |
Cow position: | chr5:59662946-59662832 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 92 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 9-125 |
Cow position: | chr5:35235577-35235461 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 92 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-131 |
Cow position: | chr5:55756303-55756181 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 100 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-131 |
Cow position: | chr5:74690142-74690020 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-117 |
Cow position: | chr5:59517145-59517040 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 88 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 10-120 |
Cow position: | chr5:20128165-20128275 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-121 |
Cow position: | chr5:13471221-13471331 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 89 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 10-121 |
Cow position: | chr5:32672722-32672611 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 92 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-121 |
Cow position: | chr5:41226893-41226782 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-121 |
Cow position: | chr5:45337308-45337198 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 93 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 10-124 |
Cow position: | chr5:55749925-55749811 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 93 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-124 |
Cow position: | chr5:55965781-55965667 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 94 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-131 |
Cow position: | chr5:25446998-25447119 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 21, 10 |
Conread position: | 10-131 |
Cow position: | chr5:71445503-71445625 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 11-120 |
Cow position: | chr5:14550470-14550361 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 88 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 11-124 |
Cow position: | chr5:30492680-30492566 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 93 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 11-124 |
Cow position: | chr5:43611812-43611924 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 92 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 11-129 |
Cow position: | chr5:32975446-32975327 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 11-131 |
Cow position: | chr5:59335884-59336005 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 99 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 11-133 |
Cow position: | chr5:54712956-54712833 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 104 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 12-113 |
Cow position: | chr5:54753136-54753035 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 85 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-124 |
Cow position: | chr5:53824999-53824888 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 90 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 12-131 |
Cow position: | chr5:7012736-7012617 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 100 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-131 |
Cow position: | chr5:47870937-47870822 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 13-124 |
Cow position: | chr5:43815701-43815591 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 13-127 |
Cow position: | chr5:39937231-39937344 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 94 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 13-130 |
Cow position: | chr5:19561332-19561214 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 96 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 13-130 |
Cow position: | chr5:47888615-47888499 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 25, 7 |
Conread position: | 14-139 |
Cow position: | chr5:66659626-66659755 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 17-121 |
Cow position: | chr5:56578819-56578923 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 87 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-131 |
Cow position: | chr5:12761001-12760889 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 95 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 19-121 |
Cow position: | chr5:41757733-41757835 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 26-124 |
Cow position: | chr5:17026322-17026420 (view UCSC Genome Browser custom track) |
Alignm length: | 99 |
Alignm identity: | 84 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 32-131 |
Cow position: | chr5:28456113-28456013 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 84 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 91, 0 |
Show alignments to all cow chromosomes.