Cow genome map

Conread name: Pig2-102I04

Conread position: 1-118
Cow position: chr7:31900195-31900079 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 1-124
Cow position: chr7:18958421-18958300 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 3-114
Cow position: chr7:40308397-40308287 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 3-120
Cow position: chr7:31074454-31074338 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 3-121
Cow position: chr7:41122145-41122033 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 3-124
Cow position: chr7:44993720-44993840 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 3-127
Cow position: chr7:63983178-63983303 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 3-129
Cow position: chr7:18388277-18388150 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 93, 122

Conread position: 3-129
Cow position: chr7:53221718-53221590 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 3-131
Cow position: chr7:43457557-43457425 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 125

Conread position: 3-131
Cow position: chr7:52591881-52591753 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-131
Cow position: chr7:64135345-64135221 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 40

Conread position: 4-127
Cow position: chr7:51685137-51685258 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 4-131
Cow position: chr7:38361115-38360988 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-114
Cow position: chr7:35651606-35651496 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-118
Cow position: chr7:8387290-8387178 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 5-119
Cow position: chr7:43450665-43450778 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 5-120
Cow position: chr7:46051780-46051896 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 5-120
Cow position: chr7:54108748-54108632 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 5-121
Cow position: chr7:25464690-25464806 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr7:32549287-32549171 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr7:37697929-37698045 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr7:38347724-38347609 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 5-121
Cow position: chr7:49068717-49068601 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr7:58800292-58800407 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 5-121
Cow position: chr7:63300320-63300436 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-121
Cow position: chr7:67873317-67873433 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-122
Cow position: chr7:10385003-10385119 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 5-122
Cow position: chr7:43347832-43347949 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr7:8523656-8523541 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 5-124
Cow position: chr7:9816121-9816240 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr7:11151347-11151229 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chr7:14496499-14496380 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr7:16285454-16285335 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr7:17000850-17000969 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr7:31885717-31885835 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chr7:40361775-40361893 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chr7:64384991-64384872 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-126
Cow position: chr7:19797805-19797684 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-127
Cow position: chr7:25263492-25263613 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 5-129
Cow position: chr7:39514357-39514480 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 5-129
Cow position: chr7:39516393-39516270 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 5-130
Cow position: chr7:12484423-12484548 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 5-130
Cow position: chr7:47047221-47047102 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 5-130
Cow position: chr7:54090607-54090732 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 111

Conread position: 5-131
Cow position: chr7:9128934-9128808 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 120, 33

Conread position: 5-131
Cow position: chr7:13067281-13067407 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-131
Cow position: chr7:15653810-15653682 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 5-131
Cow position: chr7:23609501-23609628 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 5-131
Cow position: chr7:32791813-32791937 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 6-113
Cow position: chr7:32813568-32813675 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-121
Cow position: chr7:27290374-27290259 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-121
Cow position: chr7:58967392-58967507 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-122
Cow position: chr7:29682325-29682210 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-93
Cow position: chr7:54037992-54037908 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-120
Cow position: chr7:9744817-9744706 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-120
Cow position: chr7:12340586-12340697 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr7:7461991-7461879 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr7:9068470-9068358 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-121
Cow position: chr7:58615392-58615501 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 9-124
Cow position: chr7:40520483-40520369 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 9-128
Cow position: chr7:12342868-12342748 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 9-128
Cow position: chr7:30290817-30290699 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 9-129
Cow position: chr7:39093798-39093678 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-131
Cow position: chr7:10945475-10945596 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 10-124
Cow position: chr7:8728657-8728543 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-124
Cow position: chr7:65988726-65988612 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-127
Cow position: chr7:22832370-22832487 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-128
Cow position: chr7:28109708-28109826 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chr7:53862636-53862754 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 10-138
Cow position: chr7:43085003-43085132 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 10-138
Cow position: chr7:43109411-43109281 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 11-121
Cow position: chr7:32093380-32093490 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-124
Cow position: chr7:32823927-32823814 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-131
Cow position: chr7:21174943-21175070 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 11-133
Cow position: chr7:41346903-41346782 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 113

Conread position: 12-130
Cow position: chr7:49942003-49941887 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 12-131
Cow position: chr7:13606584-13606705 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 12-131
Cow position: chr7:25195673-25195797 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 12-131
Cow position: chr7:39022079-39021960 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-124
Cow position: chr7:53834459-53834348 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-124
Cow position: chr7:68173028-68172917 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-130
Cow position: chr7:53579259-53579142 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-131
Cow position: chr7:7616906-7617025 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 14-117
Cow position: chr7:53270955-53271058 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-121
Cow position: chr7:23615822-23615716 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-121
Cow position: chr7:42335452-42335557 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.