Cow genome map

Conread name: Pig2-110L12

Conread position: 1-225
Cow position: chr1:3661051-3661262 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 74

Conread position: 1-225
Cow position: chr1:12595888-12596107 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 68, 164

Conread position: 2-138
Cow position: chr1:79640276-79640412 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 67, 122

Conread position: 2-148
Cow position: chr1:89349977-89349829 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 43

Conread position: 2-166
Cow position: chr1:70828915-70828752 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 41, 103

Conread position: 2-168
Cow position: chr1:43703421-43703254 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 26

Conread position: 2-168
Cow position: chr1:86682548-86682716 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 27

Conread position: 2-183
Cow position: chr1:88913332-88913149 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 26

Conread position: 2-188
Cow position: chr1:20544310-20544122 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 123

Conread position: 2-189
Cow position: chr1:12978694-12978506 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 67, 47

Conread position: 2-202
Cow position: chr1:74947105-74947310 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 45, 23

Conread position: 2-221
Cow position: chr1:56225481-56225273 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 67, 153

Conread position: 2-224
Cow position: chr1:44165098-44164873 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 2-224
Cow position: chr1:83582921-83583143 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 27

Conread position: 2-225
Cow position: chr1:13637651-13637877 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 67, 47

Conread position: 2-225
Cow position: chr1:20205042-20204820 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 48

Conread position: 2-225
Cow position: chr1:24133048-24133262 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 139, 34

Conread position: 2-225
Cow position: chr1:41056690-41056478 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 139, 29

Conread position: 2-225
Cow position: chr1:41697070-41696848 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 28

Conread position: 2-225
Cow position: chr1:43505541-43505317 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 165

Conread position: 2-225
Cow position: chr1:82884381-82884596 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 179
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 67, 29

Conread position: 2-225
Cow position: chr1:88652643-88652424 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 139, 42

Conread position: 2-225
Cow position: chr1:89509909-89510139 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 36, 27

Conread position: 2-225
Cow position: chr1:94404226-94404010 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 67, 34

Conread position: 2-229
Cow position: chr1:4414193-4414418 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 177

Conread position: 3-225
Cow position: chr1:100450163-100450391 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 47

Conread position: 7-225
Cow position: chr1:41004353-41004574 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 8-177
Cow position: chr1:85647774-85647944 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 28

Conread position: 9-212
Cow position: chr1:82443449-82443650 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 39, 18

Conread position: 13-212
Cow position: chr1:7350549-7350345 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 25-221
Cow position: chr1:4291151-4290956 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 43, 21

Conread position: 26-224
Cow position: chr1:74084205-74084397 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 37, 18

Conread position: 27-172
Cow position: chr1:84235340-84235490 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 27-264
Cow position: chr1:69415720-69415962 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 80

Conread position: 28-225
Cow position: chr1:99095352-99095157 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 141

Conread position: 34-203
Cow position: chr1:3243920-3243754 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 33, 19

Conread position: 34-205
Cow position: chr1:89083092-89082921 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 145
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 36, 13

Conread position: 36-175
Cow position: chr1:80311446-80311310 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 13

Conread position: 42-225
Cow position: chr1:99637803-99637986 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 12, 37

Conread position: 53-224
Cow position: chr1:56635059-56634893 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 66

Conread position: 59-213
Cow position: chr1:40089914-40089757 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 68-225
Cow position: chr1:14981173-14981325 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 73, 97

Show alignments to all cow chromosomes.