Cow genome map
| Conread name: | Pig2-110L12 |
| Conread position: | 1-225 |
| Cow position: | chr10:34175008-34175233 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 67, 172 |
| Conread position: | 1-234 |
| Cow position: | chr10:40163950-40164175 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 2-164 |
| Cow position: | chr10:39228130-39227966 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-168 |
| Cow position: | chr10:24971628-24971792 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 67, 140 |
| Conread position: | 2-177 |
| Cow position: | chr10:54469411-54469586 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 2-180 |
| Cow position: | chr10:15462474-15462298 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 67, 163 |
| Conread position: | 2-188 |
| Cow position: | chr10:66199726-66199905 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 2-210 |
| Cow position: | chr10:3362599-3362397 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 67, 88 |
| Conread position: | 2-212 |
| Cow position: | chr10:24744528-24744324 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 139, 67 |
| Conread position: | 2-223 |
| Cow position: | chr10:668864-668647 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 53, 26 |
| Conread position: | 2-224 |
| Cow position: | chr10:28152396-28152619 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 2-224 |
| Cow position: | chr10:37415772-37415549 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 2-224 |
| Cow position: | chr10:50558942-50559163 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 2-225 |
| Cow position: | chr10:7366801-7367026 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 7 |
| Conread position: | 2-225 |
| Cow position: | chr10:10134969-10134741 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 2-225 |
| Cow position: | chr10:11966861-11967082 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 139, 81 |
| Conread position: | 2-225 |
| Cow position: | chr10:20553166-20552944 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 2-225 |
| Cow position: | chr10:21422174-21422389 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 38, 115 |
| Conread position: | 2-225 |
| Cow position: | chr10:21657409-21657183 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-225 |
| Cow position: | chr10:22520179-22520403 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 156 |
| Conread position: | 2-225 |
| Cow position: | chr10:22527919-22528138 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 2-225 |
| Cow position: | chr10:29252150-29251925 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-225 |
| Cow position: | chr10:31027661-31027881 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 41, 181 |
| Conread position: | 2-225 |
| Cow position: | chr10:34655128-34655348 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 67, 165 |
| Conread position: | 2-225 |
| Cow position: | chr10:45371039-45370818 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 67, 169 |
| Conread position: | 2-225 |
| Cow position: | chr10:56828335-56828558 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 37, 20 |
| Conread position: | 2-225 |
| Cow position: | chr10:59571884-59571661 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 139, 13 |
| Conread position: | 3-225 |
| Cow position: | chr10:13391066-13391290 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 3-225 |
| Cow position: | chr10:37668174-37668397 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 3-225 |
| Cow position: | chr10:54504586-54504365 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 3-225 |
| Cow position: | chr10:58259545-58259752 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 3-225 |
| Cow position: | chr10:63940755-63940538 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 8-204 |
| Cow position: | chr10:31534709-31534525 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 9-225 |
| Cow position: | chr10:31400917-31401135 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 9-225 |
| Cow position: | chr10:35791908-35791696 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 31, 38 |
| Conread position: | 12-225 |
| Cow position: | chr10:15318857-15318651 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 12-225 |
| Cow position: | chr10:15817819-15818033 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 12-225 |
| Cow position: | chr10:63276366-63276154 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 13-225 |
| Cow position: | chr10:40906290-40906074 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 15-222 |
| Cow position: | chr10:24871860-24871651 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 43, 7 |
| Conread position: | 29-225 |
| Cow position: | chr10:805156-804958 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 23, 106 |
| Conread position: | 35-212 |
| Cow position: | chr10:37124943-37125126 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 35-225 |
| Cow position: | chr10:19094601-19094411 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 133 |
| Conread position: | 41-187 |
| Cow position: | chr10:10120143-10119996 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 10, 6 |
| Conread position: | 41-224 |
| Cow position: | chr10:20517213-20517027 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 44-223 |
| Cow position: | chr10:29211902-29211723 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 60 |
| Conread position: | 46-225 |
| Cow position: | chr10:59675667-59675843 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 95, 124 |
| Conread position: | 63-195 |
| Cow position: | chr10:24375475-24375342 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 75-221 |
| Cow position: | chr10:5847592-5847736 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 66, 57 |
Show alignments to all cow chromosomes.