Cow genome map
| Conread name: | Pig2-110L12 |
| Conread position: | 1-225 |
| Cow position: | chr11:30192165-30191938 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 68, 34 |
| Conread position: | 2-148 |
| Cow position: | chr11:55494668-55494522 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 67, 74 |
| Conread position: | 2-166 |
| Cow position: | chr11:30830625-30830791 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-168 |
| Cow position: | chr11:59155888-59156056 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-212 |
| Cow position: | chr11:59702475-59702266 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 67, 74 |
| Conread position: | 2-224 |
| Cow position: | chr11:45646604-45646824 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 67, 167 |
| Conread position: | 2-224 |
| Cow position: | chr11:48474692-48474478 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 2-224 |
| Cow position: | chr11:83043374-83043591 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 2-225 |
| Cow position: | chr11:8428500-8428263 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 70, 33 |
| Conread position: | 2-225 |
| Cow position: | chr11:10620340-10620557 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 191, 67 |
| Conread position: | 2-225 |
| Cow position: | chr11:16342240-16342473 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 67, 131 |
| Conread position: | 2-225 |
| Cow position: | chr11:24937654-24937430 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 122 |
| Conread position: | 2-225 |
| Cow position: | chr11:34121187-34120966 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 38, 69 |
| Conread position: | 2-225 |
| Cow position: | chr11:36182679-36182457 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 2-225 |
| Cow position: | chr11:39115484-39115262 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 67, 150 |
| Conread position: | 2-225 |
| Cow position: | chr11:62150902-62151113 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 2-225 |
| Cow position: | chr11:81162444-81162663 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 67, 106 |
| Conread position: | 2-225 |
| Cow position: | chr11:83066486-83066264 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 3-183 |
| Cow position: | chr11:25387054-25386871 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 3-225 |
| Cow position: | chr11:11125651-11125432 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 66, 46 |
| Conread position: | 7-186 |
| Cow position: | chr11:955351-955170 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 38 |
| Conread position: | 7-225 |
| Cow position: | chr11:75355594-75355378 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 133, 66 |
| Conread position: | 8-225 |
| Cow position: | chr11:28644070-28643850 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 8-225 |
| Cow position: | chr11:63516810-63516592 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 9-194 |
| Cow position: | chr11:47851008-47850826 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 9-202 |
| Cow position: | chr11:36672062-36672259 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 16-225 |
| Cow position: | chr11:65431036-65430830 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 152 |
| Conread position: | 34-187 |
| Cow position: | chr11:64077543-64077696 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 37-225 |
| Cow position: | chr11:41577059-41577240 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 38-225 |
| Cow position: | chr11:26483669-26483487 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 41-225 |
| Cow position: | chr11:15504060-15503869 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 41-225 |
| Cow position: | chr11:76114604-76114423 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 43-225 |
| Cow position: | chr11:25165393-25165212 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 9, 144 |
| Conread position: | 45-225 |
| Cow position: | chr11:84924147-84924330 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 53-226 |
| Cow position: | chr11:57111367-57111541 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 57-225 |
| Cow position: | chr11:6329185-6329014 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 12, 119 |
| Conread position: | 75-224 |
| Cow position: | chr11:29947014-29947157 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.